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Dr. PI's Mtbook

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Rv2898c

384 bp reverse orf at  [08:43]

-> Mtbook page 991


Function

unknown


Protein

128 aminoacids, 14,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2898c, Tigr MT2966

Rv2899c

828 bp reverse orf at  [08:43]

-> Mtbook page 991


fdhD

affects formate dehydrogenase-N


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

276 aminoacids, 29,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fdhD, fdhD and M. tuberculosis,
affects formate dehydrogenase-N,
Sanger Rv2899c, Tigr MT2967

Rv2900c

2337 bp reverse orf at  [08:43]

-> Mtbook page 991


fdhF

molybdopterin-containing


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

779 aminoacids, 84,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fdhF, fdhF and M. tuberculosis,
molybdopterin-containing,
Sanger Rv2900c, Tigr MT2968

Rv2901c

303 bp reverse orf at  [08:44]

-> Mtbook page 992


Function

unknown


Protein

101 aminoacids, 12,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2901c, Tigr MT2969

Rv2902c

792 bp reverse orf at  [08:44]

-> Mtbook page 992


rnhB

ribonuclease HII


Function

Classification II. B.1
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 1. RNA


Protein

264 aminoacids, 27,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rnhB, rnhB and M. tuberculosis,
ribonuclease HII,
Sanger Rv2902c, Tigr MT2970

Rv2903c

882 bp reverse orf at  [08:44]

-> Mtbook page 992


lepB

signal peptidase I


Function

Classification III. D
Category III. Cell processes
Class D. Protein and peptide secretion


Protein

294 aminoacids, 31,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lepB, lepB and M. tuberculosis,
signal peptidase I,
Sanger Rv2903c, Tigr MT2971

Rv2904c

339 bp reverse orf at  [08:44]

-> Mtbook page 992


rplS

50S ribosomal protein L19


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

113 aminoacids, 13 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplS, rplS and M. tuberculosis,
50S ribosomal protein L19,
Sanger Rv2904c, Tigr MT2972

Rv2905

942 bp forward orf at  [08:44]

-> Mtbook page 993


lppW

Slight similarity to beta-lactamase


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

314 aminoacids, 33,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lppW, lppW and M. tuberculosis,
Slight similarity to beta-lactamase,
Sanger Rv2905, Tigr MT2973

Rv2906c

690 bp reverse orf at  [08:44]

-> Mtbook page 993


trmD

tRNA (guanine-N1)-methyltransferase


Function

Classification II. A.3
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 3. Aminoacyl tRNA synthases and their modification


Protein

230 aminoacids, 25,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: trmD, trmD and M. tuberculosis,
tRNA (guanine-N1)-methyltransferase,
Sanger Rv2906c, Tigr MT2974

Rv2907c

528 bp reverse orf at  [08:44]

-> Mtbook page 993


rimM

16S rRNA processing protein


Function

Classification II. A.2
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 2. Ribosome modification and maturation


Protein

176 aminoacids, 18,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rimM, rimM and M. tuberculosis,
16S rRNA processing protein ,
Sanger Rv2907c, Tigr MT2975

Rv2908c

240 bp reverse orf at  [08:45]

-> Mtbook page 993


Function

unknown


Protein

80 aminoacids, 8,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2908c, Tigr MT2976

Rv2909c

486 bp reverse orf at  [08:45]

-> Mtbook page 993


rpsP

30S ribosomal protein S16


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

162 aminoacids, 17,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rpsP, rpsP and M. tuberculosis,
30S ribosomal protein S16,
Sanger Rv2909c, Tigr MT2977

Rv2910c

441 bp reverse orf at  [08:45]

-> Mtbook page 994


Function

unknown


Protein

147 aminoacids, 17 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2910c, Tigr MT2978

Rv2911

873 bp forward orf at  [08:45]

-> Mtbook page 994


dacB

penicillin binding protein


Function

Classification II. C.3
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 3. Murein sacculus and peptidoglycan


Protein

291 aminoacids, 29,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: dacB, dacB and M. tuberculosis,
penicillin binding protein,
Sanger Rv2911, Tigr MT2979

Rv2912c

585 bp reverse orf at  [08:45]

-> Mtbook page 994


transcriptional regulator (TetR/AcrR family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

195 aminoacids, 21,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (TetR/AcrR family),
Sanger Rv2912c, Tigr MT2980

Rv2913c

1833 bp reverse orf at  [08:45]

-> Mtbook page 994


probable D-amino acid aminohydrolase


Function

Classification I. A.2
Category I. Small-molecule metabolism
Class A. Degradation
Group 2. Amino acids and amines


Protein

611 aminoacids, 67,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable D-amino acid aminohydrolase,
Sanger Rv2913c, Tigr MT2981

Rv2914c

1755 bp reverse orf at  [08:45]

-> Mtbook page 995


pknI

serine-threonine protein kinase


Function

Classification I. J.3
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 3. Serine-threonine protein kinases and phosphoprotein phosphatases


Protein

585 aminoacids, 61,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pknI, pknI and M. tuberculosis,
serine-threonine protein kinase,
Sanger Rv2914c, Tigr MT2982

Rv2915c

1110 bp reverse orf at  [08:46]

-> Mtbook page 995


Function

unknown


Protein

370 aminoacids, 39,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2915c, Tigr MT2983

Rv2916c

1575 bp reverse orf at  [08:46]

-> Mtbook page 996


ffh

signal recognition particle protein


Function

Classification III. D
Category III. Cell processes
Class D. Protein and peptide secretion


Protein

525 aminoacids, 55 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ffh, ffh and M. tuberculosis,
signal recognition particle protein,
Sanger Rv2916c, Tigr MT2984

Rv2917

1878 bp forward orf at  [08:46]

-> Mtbook page 996


Function

unknown


Protein

626 aminoacids, 68,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2917, Tigr MT2985

Rv2918c

2424 bp reverse orf at  [08:46]

-> Mtbook page 997


glnD

uridylyltransferase


Function

Classification I. D.1
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 1. Glutamate family


Protein

808 aminoacids, 86,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glnD, glnD and M. tuberculosis,
uridylyltransferase,
Sanger Rv2918c, Tigr MT2986

Rv2919c

336 bp reverse orf at  [08:47]

-> Mtbook page 998


glnB

nitrogen regulatory protein


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

112 aminoacids, 12,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glnB, glnB and M. tuberculosis,
nitrogen regulatory protein,
Sanger Rv2919c, Tigr MT2987

Rv2920c

1431 bp reverse orf at  [08:47]

-> Mtbook page 998


amt

putative ammonium transporter


Function

Classification III. A.2
Category III. Cell processes
Class A. Transport/binding proteins
Group 2. Cations


Protein

477 aminoacids, 49,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: amt, amt and M. tuberculosis,
putative ammonium transporter,
Sanger Rv2920c, Tigr MT2988

Rv2921c

1266 bp reverse orf at  [08:47]

-> Mtbook page 998


ftsY

cell division protein FtsY


Function

Classification III. C
Category III. Cell processes
Class C. Cell division


Protein

422 aminoacids, 44 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ftsY, ftsY and M. tuberculosis,
cell division protein FtsY,
Sanger Rv2921c, Tigr MT2989

Rv2922c

3867 bp reverse orf at  [08:47]

-> Mtbook page 999


smc

member of Smc1/Cut3/Cut14 family


Function

Classification III. C
Category III. Cell processes
Class C. Cell division


Protein

1289 aminoacids, 139,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: smc, smc and M. tuberculosis,
member of Smc1/Cut3/Cut14 family,
Sanger Rv2922c, Tigr MT2990

Rv2923c

411 bp reverse orf at  [08:48]

-> Mtbook page 1000


Function

unknown


Protein

137 aminoacids, 14,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2923c, Tigr MT2992

Rv2924c

867 bp reverse orf at  [08:48]

-> Mtbook page 1000


fpg

formamidopyrimidine-DNA glycosylase


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

289 aminoacids, 32 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fpg, fpg and M. tuberculosis,
formamidopyrimidine-DNA glycosylase,
Sanger Rv2924c, Tigr MT2994

Rv2925c

720 bp reverse orf at  [08:48]

-> Mtbook page 1000


rnc

RNAse III


Function

Classification II. B.1
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 1. RNA


Protein

240 aminoacids, 25,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rnc, rnc and M. tuberculosis,
RNAse III,
Sanger Rv2925c, Tigr MT2995