<

Dr. PI's Mtbook

>

Rv2802c

1041 bp reverse orf at  [08:27]

-> Mtbook page 961


Function

unknown


Protein

347 aminoacids, 38,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2802c, Tigr MT2870

Rv2803c

447 bp reverse orf at  [08:27]

-> Mtbook page 961


Function

unknown


Protein

149 aminoacids, 15,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2803c

Rv2804c

627 bp reverse orf at  [08:27]

-> Mtbook page 961


Function

unknown


Protein

209 aminoacids, 22,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2804c, Tigr MT2872

Rv2805

402 bp forward orf at  [08:28]

-> Mtbook page 961


Function

unknown


Protein

134 aminoacids, 14,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2805

Rv2806

189 bp forward orf at  [08:28]

-> Mtbook page 961


Function

unknown


Protein

63 aminoacids, 6,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2806, Tigr MT2873

Rv2807

1152 bp forward orf at  [08:28]

-> Mtbook page 962


Function

unknown


Protein

384 aminoacids, 42,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2807, Tigr MT2874

Rv2808

255 bp forward orf at  [08:28]

-> Mtbook page 962


Function

unknown


Protein

85 aminoacids, 9,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2808, Tigr MT2875

Rv2809

309 bp forward orf at  [08:28]

-> Mtbook page 962


Function

unknown


Protein

103 aminoacids, 11,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2809, Tigr MT2876

Rv2810c

399 bp reverse orf at  [08:28]

-> Mtbook page 962


IS1555'

probable truncated


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

133 aminoacids, 14,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1555', IS1555' and M. tuberculosis,
probable truncated,
Sanger Rv2810c, Tigr MT2877

Rv2811

606 bp forward orf at  [08:28]

-> Mtbook page 962


Function

unknown


Protein

202 aminoacids, 21,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2811, Tigr MT2878

Rv2812

1407 bp forward orf at  [08:28]

-> Mtbook page 962


IS1604

low similarity to transposases


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

469 aminoacids, 52,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1604, IS1604 and M. tuberculosis,
low similarity to transposases,
Sanger Rv2812, Tigr MT2879

Rv2813

810 bp forward orf at  [08:28]

-> Mtbook page 963


probable general secretion pathway protein


Function

Classification III. D
Category III. Cell processes
Class D. Protein and peptide secretion


Protein

270 aminoacids, 29,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable general secretion pathway protein ,
Sanger Rv2813, Tigr MT2880

Rv2814c

936 bp reverse orf at  [08:29]

-> Mtbook page 964


IS6110


Function

Classification IV. B.1.a
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup a


Protein

312 aminoacids, 35,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS6110, IS6110 and M. tuberculosis,
Sanger Rv2814c, Tigr MT2881

Rv2815c

324 bp reverse orf at  [08:29]

-> Mtbook page 964


IS6110


Function

Classification IV. B.1.a
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup a


Protein

108 aminoacids, 12 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS6110, IS6110 and M. tuberculosis,
Sanger Rv2815c, Tigr MT2882

Rv2816c

339 bp reverse orf at  [08:29]

-> Mtbook page 965


Function

unknown


Protein

113 aminoacids, 12,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2816c, Tigr MT2883

Rv2817c

1014 bp reverse orf at  [08:29]

-> Mtbook page 965


Function

unknown


Protein

338 aminoacids, 37,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2817c, Tigr MT2884

Rv2818c

1146 bp reverse orf at  [08:30]

-> Mtbook page 965


Function

unknown


Protein

382 aminoacids, 42,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2818c, Tigr MT2885

Rv2819c

1125 bp reverse orf at  [08:30]

-> Mtbook page 965


Function

unknown


Protein

375 aminoacids, 42,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2819c, Tigr MT2886

Rv2820c

906 bp reverse orf at  [08:30]

-> Mtbook page 966


Function

unknown


Protein

302 aminoacids, 32,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2820c, Tigr MT2887

Rv2821c

708 bp reverse orf at  [08:30]

-> Mtbook page 966


Function

unknown


Protein

236 aminoacids, 25,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2821c, Tigr MT2888

Rv2822c

372 bp reverse orf at  [08:30]

-> Mtbook page 966


Function

unknown


Protein

124 aminoacids, 14,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2822c, Tigr MT2889

Rv2823c

2427 bp reverse orf at  [08:30]

-> Mtbook page 966


Function

unknown


Protein

809 aminoacids, 90,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2823c, Tigr MT2890

Rv2824c

942 bp reverse orf at  [08:31]

-> Mtbook page 967


Function

unknown


Protein

314 aminoacids, 34,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2824c, Tigr MT2891

Rv2825c

645 bp reverse orf at  [08:31]

-> Mtbook page 967


Function

unknown


Protein

215 aminoacids, 23,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2825c, Tigr MT2892

Rv2826c

882 bp reverse orf at  [08:31]

-> Mtbook page 968


Function

unknown


Protein

294 aminoacids, 33,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2826c, Tigr MT2893

Rv2827c

885 bp reverse orf at  [08:31]

-> Mtbook page 968


Function

unknown


Protein

295 aminoacids, 32,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2827c, Tigr MT2894

Rv2828c

543 bp reverse orf at  [08:31]

-> Mtbook page 968


Function

unknown


Protein

181 aminoacids, 19,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2828c

Rv2829c

390 bp reverse orf at  [08:31]

-> Mtbook page 969


Function

unknown


Protein

130 aminoacids, 14,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2829c

Rv2830c

213 bp reverse orf at  [08:31]

-> Mtbook page 969


similar to phage P1 phdgene


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

71 aminoacids, 7,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to phage P1 phdgene,
Sanger Rv2830c

Rv2831

747 bp forward orf at  [08:32]

-> Mtbook page 969


echA16

enoyl-CoA hydratase/isomerase superfamily


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

249 aminoacids, 26,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: echA16, echA16 and M. tuberculosis,
enoyl-CoA hydratase/isomerase superfamily,
Sanger Rv2831, Tigr MT2897

Rv2832c

1080 bp reverse orf at  [08:32]

-> Mtbook page 969


ugpC

sn-glycerol-3-phosphate transport ATP-binding protein


Function

Classification III. A.3
Category III. Cell processes
Class A. Transport/binding proteins
Group 3. Carbohydrates, organic acids and alcohols


Protein

360 aminoacids, 39,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ugpC, ugpC and M. tuberculosis,
sn-glycerol-3-phosphate transport ATP-binding protein,
Sanger Rv2832c, Tigr MT2898

Rv2833c

1308 bp reverse orf at  [08:32]

-> Mtbook page 969


ugpB

sn-glycerol-3-phosphate-binding periplasmic lipoprotein


Function

Classification III. A.3
Category III. Cell processes
Class A. Transport/binding proteins
Group 3. Carbohydrates, organic acids and alcohols


Protein

436 aminoacids, 46,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ugpB, ugpB and M. tuberculosis,
sn-glycerol-3-phosphate-binding periplasmic lipoprotein,
Sanger Rv2833c, Tigr MT2899

Rv2834c

825 bp reverse orf at  [08:32]

-> Mtbook page 970


ugpE

sn-glycerol-3-phosphate transport system protein


Function

Classification III. A.3
Category III. Cell processes
Class A. Transport/binding proteins
Group 3. Carbohydrates, organic acids and alcohols


Protein

275 aminoacids, 30,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ugpE, ugpE and M. tuberculosis,
sn-glycerol-3-phosphate transport system protein,
Sanger Rv2834c, Tigr MT2900

Rv2835c

909 bp reverse orf at  [08:32]

-> Mtbook page 970


ugpA

sn-glycerol-3-phosphate permease


Function

Classification III. A.3
Category III. Cell processes
Class A. Transport/binding proteins
Group 3. Carbohydrates, organic acids and alcohols


Protein

303 aminoacids, 34,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ugpA, ugpA and M. tuberculosis,
sn-glycerol-3-phosphate permease,
Sanger Rv2835c, Tigr MT2901

Rv2836c

1317 bp reverse orf at  [08:32]

-> Mtbook page 970


dinF

DNA-damage-inducible protein


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

439 aminoacids, 44,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: dinF, dinF and M. tuberculosis,
DNA-damage-inducible protein,
Sanger Rv2836c, Tigr MT2902