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Dr. PI's Mtbook

>

Rv2527

399 bp forward orf at  [07:45]

-> Mtbook page 881


Function

unknown


Protein

133 aminoacids, 15,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2527, Tigr MT2602

Rv2528c

918 bp reverse orf at  [07:45]

-> Mtbook page 881


mrr

restriction system protein


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

306 aminoacids, 33,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mrr, mrr and M. tuberculosis,
restriction system protein,
Sanger Rv2528c, Tigr MT2603

Rv2529

1389 bp forward orf at  [07:45]

-> Mtbook page 881


Function

unknown


Protein

463 aminoacids, 50,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2529, Tigr MT2604

Rv2530c

417 bp reverse orf at  [07:45]

-> Mtbook page 881


Function

unknown


Protein

139 aminoacids, 14,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2530c, Tigr MT2605

Rv2531c

2841 bp reverse orf at  [07:45]

-> Mtbook page 882


adi

ornithine/arginine decarboxylase


Function

Classification I. A.2
Category I. Small-molecule metabolism
Class A. Degradation
Group 2. Amino acids and amines


Protein

947 aminoacids, 106 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: adi, adi and M. tuberculosis,
ornithine/arginine decarboxylase,
Sanger Rv2531c, Tigr MT2607

Rv2532c

399 bp reverse orf at  [07:46]

-> Mtbook page 883


Function

unknown


Protein

133 aminoacids, 14,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2532c, Tigr MT2608

Rv2533c

468 bp reverse orf at  [07:46]

-> Mtbook page 883


nusB

N-utilization substance protein B


Function

Classification II. A.7
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 7. RNA synthesis, RNA modification and DNA transcription


Protein

156 aminoacids, 16,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: nusB, nusB and M. tuberculosis,
N-utilization substance protein B,
Sanger Rv2533c, Tigr MT2608

Rv2534c

561 bp reverse orf at  [07:46]

-> Mtbook page 883


efp

elongation factor P


Function

Classification II. A.6
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 6. Protein translation and modification


Protein

187 aminoacids, 20,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: efp, efp and M. tuberculosis,
elongation factor P,
Sanger Rv2534c, Tigr MT2609

Rv2535c

1116 bp reverse orf at  [07:46]

-> Mtbook page 883


pepQ

cytoplasmic peptidase


Function

Classification II. B.3
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 3. Proteins, peptides and glycopeptides


Protein

372 aminoacids, 38,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pepQ, pepQ and M. tuberculosis,
cytoplasmic peptidase,
Sanger Rv2535c, Tigr MT2610

Rv2536

690 bp forward orf at  [07:46]

-> Mtbook page 883


potential membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

230 aminoacids, 24,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

potential membrane protein,
Sanger Rv2536, Tigr MT2611

Rv2537c

441 bp reverse orf at  [07:46]

-> Mtbook page 884


aroD

3-dehydroquinate dehydratase


Function

Classification I. D.4
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 4. Aromatic amino acid family


Protein

147 aminoacids, 15,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: aroD, aroD and M. tuberculosis,
3-dehydroquinate dehydratase,
Sanger Rv2537c, Tigr MT2612

Rv2538c

1086 bp reverse orf at  [07:47]

-> Mtbook page 884


aroB

3-dehydroquinate synthase


Function

Classification I. D.4
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 4. Aromatic amino acid family


Protein

362 aminoacids, 38,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: aroB, aroB and M. tuberculosis,
3-dehydroquinate synthase,
Sanger Rv2538c, Tigr MT2613

Rv2539c

528 bp reverse orf at  [07:47]

-> Mtbook page 884


aroK

shikimate kinase I


Function

Classification I. D.4
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 4. Aromatic amino acid family


Protein

176 aminoacids, 18,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: aroK, aroK and M. tuberculosis,
shikimate kinase I,
Sanger Rv2539c, Tigr MT2614

Rv2540c

1203 bp reverse orf at  [07:47]

-> Mtbook page 884


aroF

chorismate synthase


Function

Classification I. D.4
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 4. Aromatic amino acid family


Protein

401 aminoacids, 41,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: aroF, aroF and M. tuberculosis,
chorismate synthase,
Sanger Rv2540c, Tigr MT2615

Rv2541

405 bp forward orf at  [07:47]

-> Mtbook page 885


Function

unknown


Protein

135 aminoacids, 13,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2541

Rv2542

1209 bp forward orf at  [07:47]

-> Mtbook page 885


Function

unknown


Protein

403 aminoacids, 42,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2542, Tigr MT2616

Rv2543

657 bp forward orf at  [07:47]

-> Mtbook page 885


lppA

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

219 aminoacids, 24,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lppA, lppA and M. tuberculosis,
lipoprotein,
Sanger Rv2543, Tigr MT2618

Rv2544

660 bp forward orf at  [07:47]

-> Mtbook page 885


lppB

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

220 aminoacids, 24,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lppB, lppB and M. tuberculosis,
lipoprotein,
Sanger Rv2544, Tigr MT2620

Rv2545

276 bp forward orf at  [07:48]

-> Mtbook page 886


Function

unknown


Protein

92 aminoacids, 10,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2545, Tigr MT2621

Rv2546

411 bp forward orf at  [07:48]

-> Mtbook page 886


Function

unknown


Protein

137 aminoacids, 15 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2546, Tigr MT2622

Rv2547

255 bp forward orf at  [07:48]

-> Mtbook page 886


Function

unknown


Protein

85 aminoacids, 9,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2547, Tigr MT2623

Rv2548

375 bp forward orf at  [07:48]

-> Mtbook page 886


Function

unknown


Protein

125 aminoacids, 13,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2548, Tigr MT2624

Rv2549c

393 bp reverse orf at  [07:48]

-> Mtbook page 886


Function

unknown


Protein

131 aminoacids, 14,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2549c

Rv2550c

243 bp reverse orf at  [07:48]

-> Mtbook page 886


Function

unknown


Protein

81 aminoacids, 9,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2550c, Tigr MT2627

Rv2551c

417 bp reverse orf at  [07:48]

-> Mtbook page 887


Function

unknown


Protein

139 aminoacids, 13,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2551c, Tigr MT2628

Rv2552c

807 bp reverse orf at  [07:48]

-> Mtbook page 887


aroE

shikimate 5-dehydrogenase


Function

Classification I. D.4
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 4. Aromatic amino acid family


Protein

269 aminoacids, 27,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: aroE, aroE and M. tuberculosis,
shikimate 5-dehydrogenase,
Sanger Rv2552c, Tigr MT2629

Rv2553c

1251 bp reverse orf at  [07:48]

-> Mtbook page 887


Function

unknown


Protein

417 aminoacids, 45,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2553c, Tigr MT2630

Rv2554c

510 bp reverse orf at  [07:48]

-> Mtbook page 887


Function

unknown


Protein

170 aminoacids, 18 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2554c, Tigr MT2631

Rv2555c

2712 bp reverse orf at  [07:49]

-> Mtbook page 887


alaS

alanyl-tRNA synthase


Function

Classification II. A.3
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 3. Aminoacyl tRNA synthases and their modification


Protein

904 aminoacids, 97,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: alaS, alaS and M. tuberculosis,
alanyl-tRNA synthase,
Sanger Rv2555c, Tigr MT2632

Rv2556c

387 bp reverse orf at  [07:49]

-> Mtbook page 888


Function

unknown


Protein

129 aminoacids, 13,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2556c, Tigr MT2633

Rv2557

672 bp forward orf at  [07:49]

-> Mtbook page 888


Function

unknown


Protein

224 aminoacids, 24,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2557, Tigr MT2634

Rv2558

708 bp forward orf at  [07:49]

-> Mtbook page 889


Function

unknown


Protein

236 aminoacids, 25,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2558, Tigr MT2635

Rv2559c

1356 bp reverse orf at  [07:49]

-> Mtbook page 889


Function

unknown


Protein

452 aminoacids, 47,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2559c, Tigr MT2636

Rv2560

975 bp forward orf at  [07:50]

-> Mtbook page 889


probableproable membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

325 aminoacids, 33,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probableproable membrane protein,
Sanger Rv2560

Rv2561

291 bp forward orf at  [07:50]

-> Mtbook page 890


Function

unknown


Protein

97 aminoacids, 10,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2561

Rv2562

387 bp forward orf at  [07:50]

-> Mtbook page 890


Function

unknown


Protein

129 aminoacids, 14,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2562

Rv2563

1047 bp forward orf at  [07:50]

-> Mtbook page 890


possible membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

349 aminoacids, 36 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible membrane protein,
Sanger Rv2563, Tigr MT2639

Rv2564

990 bp forward orf at  [07:50]

-> Mtbook page 890


glnQ

probable ATP-binding transport protein


Function

Classification III. A.1
Category III. Cell processes
Class A. Transport/binding proteins
Group 1. Amino acids


Protein

330 aminoacids, 35,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glnQ, glnQ and M. tuberculosis,
probable ATP-binding transport protein,
Sanger Rv2564, Tigr MT2640