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Dr. PI's Mtbook

>

Rv2379c

4383 bp reverse orf at  [07:13]

-> Mtbook page 821


mbtF

mycobactin/exochelin synthesis (lysine ligation)


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

1461 aminoacids, 156,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mbtF, mbtF and M. tuberculosis,
mycobactin/exochelin synthesis (lysine ligation),
Sanger Rv2379c, Tigr MT2447

Rv2380c

5046 bp reverse orf at  [07:14]

-> Mtbook page 822


mbtE

mycobactin/exochelin synthesis (lysine ligation)


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

1682 aminoacids, 183,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mbtE, mbtE and M. tuberculosis,
mycobactin/exochelin synthesis (lysine ligation),
Sanger Rv2380c, Tigr MT2448

Rv2381c

3012 bp reverse orf at  [07:15]

-> Mtbook page 824


mbtD

mycobactin/exochelin synthesis (polyketide synthase)


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

1004 aminoacids, 105,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mbtD, mbtD and M. tuberculosis,
mycobactin/exochelin synthesis (polyketide synthase),
Sanger Rv2381c, Tigr MT2449

Rv2382c

1332 bp reverse orf at  [07:15]

-> Mtbook page 825


mbtC

mycobactin/exochelin synthesis


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

444 aminoacids, 46,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mbtC, mbtC and M. tuberculosis,
mycobactin/exochelin synthesis,
Sanger Rv2382c, Tigr MT2450

Rv2383c

4242 bp reverse orf at  [07:16]

-> Mtbook page 825


mbtB

mycobactin/exochelin synthesis (serine/threonine ligation)


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

1414 aminoacids, 151,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mbtB, mbtB and M. tuberculosis,
mycobactin/exochelin synthesis (serine/threonine ligation),
Sanger Rv2383c, Tigr MT2451

Rv2384

1695 bp forward orf at  [07:16]

-> Mtbook page 826


mbtA

mycobactin/exochelin synthesis (salicylate-AMP ligase)


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

565 aminoacids, 59,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mbtA, mbtA and M. tuberculosis,
mycobactin/exochelin synthesis (salicylate-AMP ligase),
Sanger Rv2384, Tigr MT2452

Rv2385

918 bp forward orf at  [07:17]

-> Mtbook page 827


lipK

probable acetyl-hydrolase


Function

Classification II. B.5
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 5. Esterases and lipases


Protein

306 aminoacids, 32,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lipK, lipK and M. tuberculosis,
probable acetyl-hydrolase,
Sanger Rv2385, Tigr MT2453

Rv2386c

1350 bp reverse orf at  [07:17]

-> Mtbook page 827


trpE2

anthranilate synthase component I


Function

Classification I. D.4
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 4. Aromatic amino acid family


Protein

450 aminoacids, 48,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: trpE2, trpE2 and M. tuberculosis,
anthranilate synthase component I,
Sanger Rv2386c, Tigr MT2454

Rv2387

1251 bp forward orf at  [07:17]

-> Mtbook page 828


Function

unknown


Protein

417 aminoacids, 45 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2387, Tigr MT2456

Rv2388c

1125 bp reverse orf at  [07:17]

-> Mtbook page 828


hemN

oxygen-independent copropor-phyrinogen III oxidase


Function

Classification I. G.12
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 12. Heme and porphyrin


Protein

375 aminoacids, 40,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: hemN, hemN and M. tuberculosis,
oxygen-independent copropor-phyrinogen III oxidase,
Sanger Rv2388c, Tigr MT2457

Rv2389c

462 bp reverse orf at  [07:17]

-> Mtbook page 829


Function

unknown


Protein

154 aminoacids, 15,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2389c, Tigr MT2458

Rv2390c

555 bp reverse orf at  [07:18]

-> Mtbook page 829


Function

unknown


Protein

185 aminoacids, 19,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2390c, Tigr MT2459

Rv2391

1689 bp forward orf at  [07:18]

-> Mtbook page 829


nirA

probable nitrite reductase/sulphite reductase


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

563 aminoacids, 63 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: nirA, nirA and M. tuberculosis,
probable nitrite reductase/sulphite reductase,
Sanger Rv2391, Tigr MT2461

Rv2392

762 bp forward orf at  [07:18]

-> Mtbook page 830


cysH

3'-phosphoadenylylsulfate (PAPS) reductase


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

254 aminoacids, 27,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cysH, cysH and M. tuberculosis,
3'-phosphoadenylylsulfate (PAPS) reductase,
Sanger Rv2392, Tigr MT2462

Rv2393

843 bp forward orf at  [07:18]

-> Mtbook page 830


Function

unknown


Protein

281 aminoacids, 29,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2393, Tigr MT2463

Rv2394

1929 bp forward orf at  [07:18]

-> Mtbook page 830


ggtB

g -glutamyltranspeptidase precursor


Function

Classification I. G.10
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 10. Thioredoxin, glutaredoxin and mycothiol


Protein

643 aminoacids, 66,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ggtB, ggtB and M. tuberculosis,
g -glutamyltranspeptidase precursor,
Sanger Rv2394, Tigr MT2464