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Dr. PI's Mtbook

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Rv2076c

249 bp reverse orf at  [06:20]

-> Mtbook page 721


Function

unknown


Protein

83 aminoacids, 9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2076c, Tigr MT2136

Rv2077c

969 bp reverse orf at  [06:20]

-> Mtbook page 721


Function

unknown


Protein

323 aminoacids, 33,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2077c, Tigr MT2137

Rv2078

312 bp forward orf at  [06:21]

-> Mtbook page 721


Function

unknown


Protein

104 aminoacids, 10,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2078, Tigr MT2139

Rv2079

1968 bp forward orf at  [06:21]

-> Mtbook page 721


Function

unknown


Protein

656 aminoacids, 69,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2079, Tigr MT2140

Rv2080

561 bp forward orf at  [06:21]

-> Mtbook page 722


lppJ

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

187 aminoacids, 20,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lppJ, lppJ and M. tuberculosis,
lipoprotein,
Sanger Rv2080, Tigr MT2141

Rv2081c

438 bp reverse orf at  [06:21]

-> Mtbook page 722


Function

unknown


Protein

146 aminoacids, 14,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2081c, Tigr MT2143

Rv2082

2163 bp forward orf at  [06:21]

-> Mtbook page 722


Function

unknown


Protein

721 aminoacids, 73,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2082, Tigr MT2144

Rv2083

942 bp forward orf at  [06:22]

-> Mtbook page 723


Function

unknown


Protein

314 aminoacids, 30,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2083, Tigr MT2145

Rv2084

1134 bp forward orf at  [06:22]

-> Mtbook page 723


Function

unknown


Protein

378 aminoacids, 41,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2084, Tigr MT2146

Rv2085

303 bp forward orf at  [06:22]

-> Mtbook page 724


IS1556

putative transposase


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

101 aminoacids, 10,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1556, IS1556 and M. tuberculosis,
putative transposase,
Sanger Rv2085, Tigr MT2147

Rv2086

651 bp forward orf at  [06:22]

-> Mtbook page 724


IS1556

putative transposase


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

217 aminoacids, 24,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1556, IS1556 and M. tuberculosis,
putative transposase,
Sanger Rv2086

Rv2087

363 bp forward orf at  [06:22]

-> Mtbook page 724


IS1556

putative transposase


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

121 aminoacids, 13 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1556, IS1556 and M. tuberculosis,
putative transposase,
Sanger Rv2087

Rv2088

1767 bp forward orf at  [06:22]

-> Mtbook page 724


pknJ

serine-threonine protein kinase


Function

Classification I. J.3
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 3. Serine-threonine protein kinases and phosphoprotein phosphatases


Protein

589 aminoacids, 61,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pknJ, pknJ and M. tuberculosis,
serine-threonine protein kinase,
Sanger Rv2088, Tigr MT2149

Rv2089c

1125 bp reverse orf at  [06:22]

-> Mtbook page 725


pepE

cytoplasmic peptidase


Function

Classification II. B.3
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 3. Proteins, peptides and glycopeptides


Protein

375 aminoacids, 39,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pepE, pepE and M. tuberculosis,
cytoplasmic peptidase,
Sanger Rv2089c, Tigr MT2150

Rv2090

1179 bp forward orf at  [06:23]

-> Mtbook page 725


partially similar to DNA polymerase I


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

393 aminoacids, 41,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

partially similar to DNA polymerase I,
Sanger Rv2090, Tigr MT2151

Rv2091c

732 bp reverse orf at  [06:23]

-> Mtbook page 725


potential transmembrane region


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

244 aminoacids, 26 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

potential transmembrane region,
Sanger Rv2091c, Tigr MT2152

Rv2092c

2718 bp reverse orf at  [06:23]

-> Mtbook page 726


helY

probable helicase, Ski2 subfamily


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

906 aminoacids, 99,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: helY, helY and M. tuberculosis,
probable helicase, Ski2 subfamily,
Sanger Rv2092c, Tigr MT2153

Rv2093c

924 bp reverse orf at  [06:23]

-> Mtbook page 726


membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

308 aminoacids, 33,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

membrane protein,
Sanger Rv2093c, Tigr MT2154

Rv2094c

249 bp reverse orf at  [06:24]

-> Mtbook page 727


Function

unknown


Protein

83 aminoacids, 8,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2094c, Tigr MT2155

Rv2095c

948 bp reverse orf at  [06:24]

-> Mtbook page 727


Function

unknown


Protein

316 aminoacids, 33,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2095c, Tigr MT2156

Rv2096c

996 bp reverse orf at  [06:24]

-> Mtbook page 727


Function

unknown


Protein

332 aminoacids, 35,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2096c, Tigr MT2157

Rv2097c

1356 bp reverse orf at  [06:24]

-> Mtbook page 727


Function

unknown


Protein

452 aminoacids, 51,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2097c, Tigr MT2158

Rv2098c

1302 bp reverse orf at  [06:24]

-> Mtbook page 728


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

434 aminoacids, 36,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv2098c, Tigr MT2159

Rv2099c

174 bp reverse orf at  [06:24]

-> Mtbook page 728


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

58 aminoacids, 5,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv2099c

Rv2100

1650 bp forward orf at  [06:24]

-> Mtbook page 728


Function

unknown


Protein

550 aminoacids, 58,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2100, Tigr MT2160

Rv2101

3039 bp forward orf at  [06:25]

-> Mtbook page 729


helZ

probable helicase, Snf2/Rad54 family


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

1013 aminoacids, 111,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: helZ, helZ and M. tuberculosis,
probable helicase, Snf2/Rad54 family,
Sanger Rv2101, Tigr MT2161

Rv2102

714 bp forward orf at  [06:25]

-> Mtbook page 730


Function

unknown


Protein

238 aminoacids, 25,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2102, Tigr MT2162

Rv2103c

432 bp reverse orf at  [06:25]

-> Mtbook page 730


Function

unknown


Protein

144 aminoacids, 15,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2103c, Tigr MT2163

Rv2104c

252 bp reverse orf at  [06:25]

-> Mtbook page 730


Function

unknown


Protein

84 aminoacids, 9,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv2104c, Tigr MT2164