<

Dr. PI's Mtbook

>

Rv1919c

462 bp reverse orf at  [05:54]

-> Mtbook page 671


weak similarity to pollen antigens


Function

Classification II. C.2
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 2. Surface polysaccharides, lipopolysaccharides, proteins and antigens


Protein

154 aminoacids, 16,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

weak similarity to pollen antigens,
Sanger Rv1919c, Tigr MT1970

Rv1920

861 bp forward orf at  [05:54]

-> Mtbook page 671


probableproable membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

287 aminoacids, 32 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probableproable membrane protein,
Sanger Rv1920, Tigr MT1971

Rv1921c

1269 bp reverse orf at  [05:54]

-> Mtbook page 671


lppF

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

423 aminoacids, 45 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lppF, lppF and M. tuberculosis,
lipoprotein,
Sanger Rv1921c, Tigr MT1972

Rv1922

1113 bp forward orf at  [05:54]

-> Mtbook page 672


probable penicillin binding protein


Function

Classification II. C.3
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 3. Murein sacculus and peptidoglycan


Protein

371 aminoacids, 39,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable penicillin binding protein,
Sanger Rv1922, Tigr MT1973

Rv1923

1338 bp forward orf at  [05:55]

-> Mtbook page 672


lipD

probable esterase


Function

Classification II. B.5
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 5. Esterases and lipases


Protein

446 aminoacids, 47,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lipD, lipD and M. tuberculosis,
probable esterase,
Sanger Rv1923, Tigr MT1974

Rv1924c

378 bp reverse orf at  [05:55]

-> Mtbook page 672


Function

unknown


Protein

126 aminoacids, 14,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1924c, Tigr MT1975

Rv1925

1860 bp forward orf at  [05:55]

-> Mtbook page 672


fadD31

acyl-CoA synthase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

620 aminoacids, 66,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadD31, fadD31 and M. tuberculosis,
acyl-CoA synthase,
Sanger Rv1925, Tigr MT1976

Rv1926c

477 bp reverse orf at  [05:55]

-> Mtbook page 673


Function

unknown


Protein

159 aminoacids, 16,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1926c, Tigr MT1977

Rv1927

771 bp forward orf at  [05:55]

-> Mtbook page 673


Function

unknown


Protein

257 aminoacids, 28,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1927, Tigr MT1979

Rv1928c

765 bp reverse orf at  [05:55]

-> Mtbook page 673


short-chain alcohol dehydrogenase family


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

255 aminoacids, 27 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

short-chain alcohol dehydrogenase family,
Sanger Rv1928c, Tigr MT1980

Rv1929c

642 bp reverse orf at  [05:56]

-> Mtbook page 674


Function

unknown


Protein

214 aminoacids, 24 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1929c

Rv1930c

522 bp reverse orf at  [05:56]

-> Mtbook page 674


Function

unknown


Protein

174 aminoacids, 18,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1930c

Rv1931c

777 bp reverse orf at  [05:56]

-> Mtbook page 674


transcriptional regulator (AraC/XylS family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

259 aminoacids, 28 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (AraC/XylS family),
Sanger Rv1931c, Tigr MT1981

Rv1932

495 bp forward orf at  [05:56]

-> Mtbook page 674


tpx

thiol peroxidase


Function

Classification III. F
Category III. Cell processes
Class F. Detoxification


Protein

165 aminoacids, 16,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: tpx, tpx and M. tuberculosis,
thiol peroxidase,
Sanger Rv1932, Tigr MT1982

Rv1933c

1089 bp reverse orf at  [05:56]

-> Mtbook page 675


fadE18

acyl-CoA dehydrogenase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

363 aminoacids, 38,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadE18, fadE18 and M. tuberculosis,
acyl-CoA dehydrogenase,
Sanger Rv1933c, Tigr MT1983

Rv1934c

1227 bp reverse orf at  [05:56]

-> Mtbook page 675


fadE17

acyl-CoA dehydrogenase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

409 aminoacids, 44,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadE17, fadE17 and M. tuberculosis,
acyl-CoA dehydrogenase,
Sanger Rv1934c, Tigr MT1984

Rv1935c

954 bp reverse orf at  [05:56]

-> Mtbook page 675


echA13

enoyl-CoA hydratase/isomerase superfamily


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

318 aminoacids, 35,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: echA13, echA13 and M. tuberculosis,
enoyl-CoA hydratase/isomerase superfamily,
Sanger Rv1935c, Tigr MT1985

Rv1936

1107 bp forward orf at  [05:56]

-> Mtbook page 676


similar alkanal monooxygenase alpha chain


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

369 aminoacids, 41,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar alkanal monooxygenase alpha chain,
Sanger Rv1936, Tigr MT1986

Rv1937

2517 bp forward orf at  [05:57]

-> Mtbook page 676


similar to ring-hydroxylating dioxygenases


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

839 aminoacids, 93,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to ring-hydroxylating dioxygenases,
Sanger Rv1937, Tigr MT1987

Rv1938

1068 bp forward orf at  [05:57]

-> Mtbook page 677


ephB

probable epoxide hydrolase


Function

Classification III. F
Category III. Cell processes
Class F. Detoxification


Protein

356 aminoacids, 39,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ephB, ephB and M. tuberculosis,
probable epoxide hydrolase,
Sanger Rv1938, Tigr MT1988

Rv1939

513 bp forward orf at  [05:57]

-> Mtbook page 677


similar nitrilotriacetate monooxygenase component


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

171 aminoacids, 18,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar nitrilotriacetate monooxygenase component,
Sanger Rv1939, Tigr MT1989

Rv1940

1059 bp forward orf at  [05:57]

-> Mtbook page 677


ribA

GTP cyclohydrolase II


Function

Classification I. G.9
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 9. Riboflavin


Protein

353 aminoacids, 36,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ribA, ribA and M. tuberculosis,
GTP cyclohydrolase II,
Sanger Rv1940, Tigr MT1990

Rv1941

768 bp forward orf at  [05:58]

-> Mtbook page 678


short-chain alcohol dehydrogenase family


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

256 aminoacids, 25,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

short-chain alcohol dehydrogenase family,
Sanger Rv1941, Tigr MT1991

Rv1942c

327 bp reverse orf at  [05:58]

-> Mtbook page 678


Function

unknown


Protein

109 aminoacids, 11,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1942c, Tigr MT1992

Rv1943c

375 bp reverse orf at  [05:58]

-> Mtbook page 678


Function

unknown


Protein

125 aminoacids, 13,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1943c, Tigr MT1993

Rv1944c

588 bp reverse orf at  [05:58]

-> Mtbook page 678


Function

unknown


Protein

196 aminoacids, 20,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1944c, Tigr MT1994

Rv1945

1362 bp forward orf at  [05:58]

-> Mtbook page 678


REP


Function

Classification IV. B.2
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 2.REP13E12 family (10)


Protein

454 aminoacids, 49,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: REP, REP and M. tuberculosis,
Sanger Rv1945, Tigr MT1995

Rv1946c

450 bp reverse orf at  [05:58]

-> Mtbook page 679


lppG

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

150 aminoacids, 15,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lppG, lppG and M. tuberculosis,
lipoprotein,
Sanger Rv1946c, Tigr MT1997

Rv1947

399 bp forward orf at  [05:58]

-> Mtbook page 679


Function

unknown


Protein

133 aminoacids, 14,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1947, Tigr MT1998

Rv1948c

348 bp reverse orf at  [05:58]

-> Mtbook page 679


Function

unknown


Protein

116 aminoacids, 12,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1948c

Rv1949c

957 bp reverse orf at  [05:58]

-> Mtbook page 679


Function

unknown


Protein

319 aminoacids, 34,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1949c, Tigr MT1999

Rv1950c

189 bp reverse orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

63 aminoacids, 7,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1950c, Tigr MT2000

Rv1951c

294 bp reverse orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

98 aminoacids, 9,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1951c, Tigr MT0001

Rv1952

213 bp forward orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

71 aminoacids, 7,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1952, Tigr MT2002

Rv1953

309 bp forward orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

103 aminoacids, 11,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1953, Tigr MT2003

Rv1954c

519 bp reverse orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

173 aminoacids, 18,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1954c

Rv1955

510 bp forward orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

170 aminoacids, 19 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1955, Tigr MT2004

Rv1956

447 bp forward orf at  [05:59]

-> Mtbook page 680


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

149 aminoacids, 16,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv1956, Tigr MT2005

Rv1957

543 bp forward orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

181 aminoacids, 20,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1957, Tigr MT2006

Rv1958c

612 bp reverse orf at  [05:59]

-> Mtbook page 680


Function

unknown


Protein

204 aminoacids, 21,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1958c