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Dr. PI's Mtbook

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Rv1687c

765 bp reverse orf at  [05:12]

-> Mtbook page 591


probable ABC transporter


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

255 aminoacids, 27,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable ABC transporter,
Sanger Rv1687c, Tigr MT1727

Rv1688

609 bp forward orf at  [05:12]

-> Mtbook page 591


probable 3-methylpurine DNA glycosylase


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

203 aminoacids, 21,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable 3-methylpurine DNA glycosylase,
Sanger Rv1688

Rv1689

1272 bp forward orf at  [05:12]

-> Mtbook page 591


tyrS

tyrosyl-tRNA synthase


Function

Classification II. A.3
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 3. Aminoacyl tRNA synthases and their modification


Protein

424 aminoacids, 46,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: tyrS, tyrS and M. tuberculosis,
tyrosyl-tRNA synthase,
Sanger Rv1689, Tigr MT1728

Rv1690

381 bp forward orf at  [05:12]

-> Mtbook page 592


lprJ

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

127 aminoacids, 13,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lprJ, lprJ and M. tuberculosis,
lipoprotein,
Sanger Rv1690, Tigr MT1729

Rv1691

750 bp forward orf at  [05:12]

-> Mtbook page 592


Function

unknown


Protein

250 aminoacids, 26,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1691, Tigr MT1730

Rv1692

1059 bp forward orf at  [05:12]

-> Mtbook page 592


probable hydrolase


Function

Classification IV. I
Category IV. Other
Class I. Miscellaneous phosphatases, lyases, and hydrolases (18)


Protein

353 aminoacids, 37 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable hydrolase,
Sanger Rv1692, Tigr MT1731

Rv1693

174 bp forward orf at  [05:12]

-> Mtbook page 592


Function

unknown


Protein

58 aminoacids, 6,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1693, Tigr MT1732

Rv1694

804 bp forward orf at  [05:13]

-> Mtbook page 592


tlyA

cytotoxin/hemolysin homologue


Function

Classification IV. A
Category IV. Other
Class A. Virulence


Protein

268 aminoacids, 28 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: tlyA, tlyA and M. tuberculosis,
cytotoxin/hemolysin homologue,
Sanger Rv1694, Tigr MT1733

Rv1695

921 bp forward orf at  [05:13]

-> Mtbook page 593


Function

unknown


Protein

307 aminoacids, 32,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1695, Tigr MT1734

Rv1696

1761 bp forward orf at  [05:13]

-> Mtbook page 593


recN

recombination and DNA repair


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

587 aminoacids, 62,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: recN, recN and M. tuberculosis,
recombination and DNA repair,
Sanger Rv1696, Tigr MT1735

Rv1697

1179 bp forward orf at  [05:13]

-> Mtbook page 594


Function

unknown


Protein

393 aminoacids, 42,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1697, Tigr MT1736

Rv1698

942 bp forward orf at  [05:13]

-> Mtbook page 594


Function

unknown


Protein

314 aminoacids, 32,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1698, Tigr MT1737

Rv1699

1758 bp forward orf at  [05:13]

-> Mtbook page 594


pyrG

CTP synthase


Function

Classification I. F.2
Category I. Small-molecule metabolism
Class F. Purines, pyrimidines, nucleosides and nucleotides
Group 2. Pyrimidine ribonucleotide biosynthesis


Protein

586 aminoacids, 63,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pyrG, pyrG and M. tuberculosis,
CTP synthase,
Sanger Rv1699, Tigr MT1738

Rv1700

621 bp forward orf at  [05:14]

-> Mtbook page 595


Function

unknown


Protein

207 aminoacids, 22,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1700, Tigr MT1739

Rv1701

933 bp forward orf at  [05:14]

-> Mtbook page 595


xerD

integrase/recombinase


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

311 aminoacids, 33,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: xerD, xerD and M. tuberculosis,
integrase/recombinase,
Sanger Rv1701, Tigr MT1740

Rv1702c

1362 bp reverse orf at  [05:14]

-> Mtbook page 595


REP


Function

Classification IV. B.2
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 2.REP13E12 family (10)


Protein

454 aminoacids, 49,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: REP, REP and M. tuberculosis,
Sanger Rv1702c, Tigr MT1741

Rv1703c

588 bp reverse orf at  [05:14]

-> Mtbook page 596


putative methyltransferase


Function

Classification IV. H
Category IV. Other
Class H. Miscellaneous transferases (61)


Protein

196 aminoacids, 21,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative methyltransferase,
Sanger Rv1703c, Tigr MT1743

Rv1704c

1668 bp reverse orf at  [05:14]

-> Mtbook page 596


cycA

transport of D-alanine, D-serine and glycine


Function

Classification III. A.1
Category III. Cell processes
Class A. Transport/binding proteins
Group 1. Amino acids


Protein

556 aminoacids, 60 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cycA, cycA and M. tuberculosis,
transport of D-alanine, D-serine and glycine,
Sanger Rv1704c, Tigr MT1744

Rv1705c

1155 bp reverse orf at  [05:15]

-> Mtbook page 597


PPE


Function

Classification IV. C.2
Category IV. Other
Class C. PE and PPE families
Group 2.PPE family (68)


Protein

385 aminoacids, 38,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PPE, PPE and M. tuberculosis,
Sanger Rv1705c, Tigr MT1745

Rv1706c

1182 bp reverse orf at  [05:15]

-> Mtbook page 597


PPE


Function

Classification IV. C.2
Category IV. Other
Class C. PE and PPE families
Group 2.PPE family (68)


Protein

394 aminoacids, 39,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PPE, PPE and M. tuberculosis,
Sanger Rv1706c, Tigr MT1746

Rv1707

1458 bp forward orf at  [05:15]

-> Mtbook page 598


probable sulphate permease


Function

Classification III. A.4
Category III. Cell processes
Class A. Transport/binding proteins
Group 4. Anions


Protein

486 aminoacids, 51,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable sulphate permease,
Sanger Rv1707, Tigr MT1748

Rv1708

954 bp forward orf at  [05:16]

-> Mtbook page 598


possible role in chromosome partitioning


Function

Classification III. C
Category III. Cell processes
Class C. Cell division


Protein

318 aminoacids, 34,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible role in chromosome partitioning ,
Sanger Rv1708, Tigr MT1749

Rv1709

834 bp forward orf at  [05:16]

-> Mtbook page 598


Function

unknown


Protein

278 aminoacids, 30,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1709, Tigr MT1750

Rv1710

693 bp forward orf at  [05:16]

-> Mtbook page 599


Function

unknown


Protein

231 aminoacids, 25,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1710, Tigr MT1751

Rv1711

762 bp forward orf at  [05:16]

-> Mtbook page 599


Function

unknown


Protein

254 aminoacids, 27,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1711

Rv1712

690 bp forward orf at  [05:16]

-> Mtbook page 599


cmk

cytidylate kinase


Function

Classification I. F.5
Category I. Small-molecule metabolism
Class F. Purines, pyrimidines, nucleosides and nucleotides
Group 5. Miscellaneous nucleoside/nucleotide reactions


Protein

230 aminoacids, 24,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cmk, cmk and M. tuberculosis,
cytidylate kinase,
Sanger Rv1712, Tigr MT1752

Rv1713

1389 bp forward orf at  [05:16]

-> Mtbook page 599


Function

unknown


Protein

463 aminoacids, 49,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1713, Tigr MT1753

Rv1714

810 bp forward orf at  [05:16]

-> Mtbook page 600


Probable oxidoreductase/gluconate 3-dehydrogenase


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

270 aminoacids, 28 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Probable oxidoreductase/gluconate 3-dehydrogenase,
Sanger Rv1714, Tigr MT1754

Rv1715

912 bp forward orf at  [05:17]

-> Mtbook page 600


fadB3

3-hydroxyacyl-CoA dehydrogenase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

304 aminoacids, 31,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadB3, fadB3 and M. tuberculosis,
3-hydroxyacyl-CoA dehydrogenase,
Sanger Rv1715, Tigr MT1754

Rv1716

828 bp forward orf at  [05:17]

-> Mtbook page 600


Function

unknown


Protein

276 aminoacids, 30,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1716, Tigr MT1755