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Dr. PI's Mtbook

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Rv1548c

2034 bp reverse orf at  [04:45]

-> Mtbook page 541


PPE


Function

Classification IV. C.2
Category IV. Other
Class C. PE and PPE families
Group 2.PPE family (68)


Protein

678 aminoacids, 66,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PPE, PPE and M. tuberculosis,
Sanger Rv1548c, Tigr MT1599

Rv1549

525 bp forward orf at  [04:46]

-> Mtbook page 542


fadD11'

acyl-CoA synthase, C-term


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

175 aminoacids, 19,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadD11', fadD11' and M. tuberculosis,
acyl-CoA synthase, C-term,
Sanger Rv1549

Rv1550

1713 bp forward orf at  [04:46]

-> Mtbook page 542


fadD11

acyl-CoA synthase, N-term


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

571 aminoacids, 62,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadD11, fadD11 and M. tuberculosis,
acyl-CoA synthase, N-term,
Sanger Rv1550, Tigr MT1600

Rv1551

1863 bp forward orf at  [04:46]

-> Mtbook page 542


plsB1

glycerol-3-phosphate acyltransferase


Function

Classification I. H.3
Category I. Small-molecule metabolism
Class H. Lipid biosynthesis
Group 3. Acyltransferases, mycoloyltransferases and phospholipid synthesis


Protein

621 aminoacids, 69,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: plsB1, plsB1 and M. tuberculosis,
glycerol-3-phosphate acyltransferase,
Sanger Rv1551, Tigr MT1601

Rv1552

1749 bp forward orf at  [04:46]

-> Mtbook page 543


frdA

fumarate reductase flavoprotein subunit


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

583 aminoacids, 63,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: frdA, frdA and M. tuberculosis,
fumarate reductase flavoprotein subunit,
Sanger Rv1552, Tigr MT1603

Rv1553

741 bp forward orf at  [04:47]

-> Mtbook page 544


frdB

fumarate reductase iron sulphur protein


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

247 aminoacids, 27,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: frdB, frdB and M. tuberculosis,
fumarate reductase iron sulphur protein,
Sanger Rv1553, Tigr MT1604

Rv1554

378 bp forward orf at  [04:47]

-> Mtbook page 544


frdC

fumarate reductase 15kD anchor protein


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

126 aminoacids, 14,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: frdC, frdC and M. tuberculosis,
fumarate reductase 15kD anchor protein,
Sanger Rv1554, Tigr MT1605

Rv1555

375 bp forward orf at  [04:47]

-> Mtbook page 544


frdD

fumarate reductase 13kD anchor protein


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

125 aminoacids, 13,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: frdD, frdD and M. tuberculosis,
fumarate reductase 13kD anchor protein,
Sanger Rv1555, Tigr MT1606

Rv1556

606 bp forward orf at  [04:47]

-> Mtbook page 544


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

202 aminoacids, 22,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv1556, Tigr MT1607

Rv1557

1191 bp forward orf at  [04:47]

-> Mtbook page 544


mmpL6

conserved large membrane protein


Function

Classification II. C.4
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 4. Conserved membrane proteins


Protein

397 aminoacids, 42,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mmpL6, mmpL6 and M. tuberculosis,
conserved large membrane protein,
Sanger Rv1557, Tigr MT1608

Rv1558

444 bp forward orf at  [04:47]

-> Mtbook page 545


Function

unknown


Protein

148 aminoacids, 16,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1558, Tigr MT1609

Rv1559

1287 bp forward orf at  [04:47]

-> Mtbook page 545


ilvA

threonine deaminase


Function

Classification I. D.7
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 7. Branched amino acid family


Protein

429 aminoacids, 45 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ilvA, ilvA and M. tuberculosis,
threonine deaminase,
Sanger Rv1559, Tigr MT1610

Rv1560

216 bp forward orf at  [04:48]

-> Mtbook page 545


Function

unknown


Protein

72 aminoacids, 8,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1560, Tigr MT1611

Rv1561

402 bp forward orf at  [04:48]

-> Mtbook page 545


Function

unknown


Protein

134 aminoacids, 14,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1561, Tigr MT1612

Rv1562c

1740 bp reverse orf at  [04:48]

-> Mtbook page 545


glgZ

maltooligosyltrehalose trehalohydrolase


Function

Classification II. A.8
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 8. Polysaccharides (cytoplasmic)


Protein

580 aminoacids, 64,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glgZ, glgZ and M. tuberculosis,
maltooligosyltrehalose trehalohydrolase,
Sanger Rv1562c, Tigr MT1613

Rv1563c

2295 bp reverse orf at  [04:48]

-> Mtbook page 546


glgY

putative a -amylase


Function

Classification II. A.8
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 8. Polysaccharides (cytoplasmic)


Protein

765 aminoacids, 82,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glgY, glgY and M. tuberculosis,
putative a -amylase,
Sanger Rv1563c, Tigr MT1614

Rv1564c

2163 bp reverse orf at  [04:48]

-> Mtbook page 547


glgX

probable glycogen debranching enzyme


Function

Classification II. A.8
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 8. Polysaccharides (cytoplasmic)


Protein

721 aminoacids, 81,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glgX, glgX and M. tuberculosis,
probable glycogen debranching enzyme,
Sanger Rv1564c, Tigr MT1615

Rv1565c

2187 bp reverse orf at  [04:49]

-> Mtbook page 547


Unknown membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

729 aminoacids, 80,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Unknown membrane protein,
Sanger Rv1565c, Tigr MT1616

Rv1566c

690 bp reverse orf at  [04:49]

-> Mtbook page 548


putative exported p60 protein homologue


Function

Classification IV. A
Category IV. Other
Class A. Virulence


Protein

230 aminoacids, 24 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative exported p60 protein homologue,
Sanger Rv1566c, Tigr MT1617

Rv1567c

282 bp reverse orf at  [04:49]

-> Mtbook page 548


Function

unknown


Protein

94 aminoacids, 10,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1567c, Tigr MT1618

Rv1568

1311 bp forward orf at  [04:49]

-> Mtbook page 548


bioA

adenosylmethionine-8-amino-7- oxononanoate aminotransferase


Function

Classification I. G.1
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 1. Biotin


Protein

437 aminoacids, 46,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: bioA, bioA and M. tuberculosis,
adenosylmethionine-8-amino-7- oxononanoate aminotransferase,
Sanger Rv1568, Tigr MT1619

Rv1569

1158 bp forward orf at  [04:49]

-> Mtbook page 549


bioF

8-amino-7-oxononanoate synthase


Function

Classification I. G.1
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 1. Biotin


Protein

386 aminoacids, 40 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: bioF, bioF and M. tuberculosis,
8-amino-7-oxononanoate synthase,
Sanger Rv1569, Tigr MT1620

Rv1570

678 bp forward orf at  [04:50]

-> Mtbook page 549


bioD

dethiobiotin synthase


Function

Classification I. G.1
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 1. Biotin


Protein

226 aminoacids, 22,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: bioD, bioD and M. tuberculosis,
dethiobiotin synthase,
Sanger Rv1570

Rv1571

507 bp forward orf at  [04:50]

-> Mtbook page 549


Function

unknown


Protein

169 aminoacids, 18,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1571

Rv1572c

81 bp reverse orf at  [04:50]

-> Mtbook page 550


Function

unknown


Protein

27 aminoacids, 3,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1572c

Rv1573

408 bp forward orf at  [04:50]

-> Mtbook page 550


phiRV1 phage related protein


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

136 aminoacids, 14,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

phiRV1 phage related protein,
Sanger Rv1573

Rv1574

309 bp forward orf at  [04:50]

-> Mtbook page 550


phiRV1 phage related protein


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

103 aminoacids, 11,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

phiRV1 phage related protein,
Sanger Rv1574

Rv1575

351 bp forward orf at  [04:50]

-> Mtbook page 550


phiRV1 phage related protein


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

117 aminoacids, 12,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

phiRV1 phage related protein,
Sanger Rv1575

Rv1576c

1419 bp reverse orf at  [04:50]

-> Mtbook page 550


phiRV1 phage related protein


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

473 aminoacids, 50,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

phiRV1 phage related protein,
Sanger Rv1576c