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Dr. PI's Mtbook

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Rv1327c

2211 bp reverse orf at  [04:03]

-> Mtbook page 461


probable glycosyl hydrolase, a -amylase family


Function

Classification II. B.4
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 4. Polysaccharides, lipopolysaccharides and phospholipids


Protein

737 aminoacids, 82,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable glycosyl hydrolase, a -amylase family,
Sanger Rv1327c, Tigr MT1369

Rv1328

2589 bp forward orf at  [04:03]

-> Mtbook page 462


glgP

probable glycogen phosphorylase


Function

Classification II. A.8
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 8. Polysaccharides (cytoplasmic)


Protein

863 aminoacids, 95,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glgP, glgP and M. tuberculosis,
probable glycogen phosphorylase,
Sanger Rv1328, Tigr MT1370

Rv1329c

1992 bp reverse orf at  [04:04]

-> Mtbook page 463


dinG

probable ATP-dependent helicase


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

664 aminoacids, 70,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: dinG, dinG and M. tuberculosis,
probable ATP-dependent helicase,
Sanger Rv1329c, Tigr MT1371

Rv1330c

1527 bp reverse orf at  [04:04]

-> Mtbook page 463


Function

unknown


Protein

509 aminoacids, 54,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1330c, Tigr MT1372

Rv1331

303 bp forward orf at  [04:04]

-> Mtbook page 464


Function

unknown


Protein

101 aminoacids, 11,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1331, Tigr MT1373

Rv1332

654 bp forward orf at  [04:04]

-> Mtbook page 464


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

218 aminoacids, 24,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv1332, Tigr MT1374

Rv1333

1032 bp forward orf at  [04:05]

-> Mtbook page 464


probable hydrolase


Function

Classification II. B.4
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 4. Polysaccharides, lipopolysaccharides and phospholipids


Protein

344 aminoacids, 34 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable hydrolase,
Sanger Rv1333, Tigr MT1375

Rv1334

438 bp forward orf at  [04:05]

-> Mtbook page 464


Function

unknown


Protein

146 aminoacids, 16,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1334

Rv1335

279 bp forward orf at  [04:05]

-> Mtbook page 464


Function

unknown


Protein

93 aminoacids, 9,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1335

Rv1336

969 bp forward orf at  [04:05]

-> Mtbook page 465


cysM

cysteine synthase B


Function

Classification I. D.3
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 3. Serine family


Protein

323 aminoacids, 34,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cysM, cysM and M. tuberculosis,
cysteine synthase B,
Sanger Rv1336, Tigr MT1377

Rv1337

720 bp forward orf at  [04:05]

-> Mtbook page 465


Function

unknown


Protein

240 aminoacids, 25,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1337, Tigr MT1378

Rv1338

813 bp forward orf at  [04:05]

-> Mtbook page 465


murI

glutamate racemase


Function

Classification II. C.3
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 3. Murein sacculus and peptidoglycan


Protein

271 aminoacids, 28,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: murI, murI and M. tuberculosis,
glutamate racemase,
Sanger Rv1338, Tigr MT1379

Rv1339

819 bp forward orf at  [04:05]

-> Mtbook page 465


Function

unknown


Protein

273 aminoacids, 29,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1339, Tigr MT1380

Rv1340

777 bp forward orf at  [04:05]

-> Mtbook page 466


rphA

ribonuclease PH


Function

Classification II. B.1
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 1. RNA


Protein

259 aminoacids, 27,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rphA, rphA and M. tuberculosis,
ribonuclease PH ,
Sanger Rv1340, Tigr MT1381

Rv1341

612 bp forward orf at  [04:06]

-> Mtbook page 466


Function

unknown


Protein

204 aminoacids, 21 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1341, Tigr MT1382

Rv1342c

360 bp reverse orf at  [04:06]

-> Mtbook page 466


pks14

polyketide synthase (chalcone synthase-like)


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

120 aminoacids, 13,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pks14, pks14 and M. tuberculosis,
polyketide synthase (chalcone synthase-like),
Sanger Rv1342c, Tigr MT1383

Rv1343c

378 bp reverse orf at  [04:06]

-> Mtbook page 466


Function

unknown


Protein

126 aminoacids, 14,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1343c, Tigr MT1384

Rv1344

318 bp forward orf at  [04:06]

-> Mtbook page 466


possible acyl carrier protein


Function

Classification I. H.1
Category I. Small-molecule metabolism
Class H. Lipid biosynthesis
Group 1. Synthesis of fatty and mycolic acids


Protein

106 aminoacids, 11,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible acyl carrier protein,
Sanger Rv1344, Tigr MT1385

Rv1345

1563 bp forward orf at  [04:06]

-> Mtbook page 466


fadD33

acyl-CoA synthase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

521 aminoacids, 54 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadD33, fadD33 and M. tuberculosis,
acyl-CoA synthase,
Sanger Rv1345, Tigr MT1387

Rv1346

1158 bp forward orf at  [04:06]

-> Mtbook page 467


fadE14

acyl-CoA dehydrogenase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

386 aminoacids, 41,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadE14, fadE14 and M. tuberculosis,
acyl-CoA dehydrogenase,
Sanger Rv1346, Tigr MT1388

Rv1347c

630 bp reverse orf at  [04:06]

-> Mtbook page 467


possible aminoglycoside 6'-N-acetyltransferase


Function

Classification IV. D
Category IV. Other
Class D. Antibiotic production and resistance


Protein

210 aminoacids, 23,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible aminoglycoside 6'-N-acetyltransferase,
Sanger Rv1347c, Tigr MT1389

Rv1348

2577 bp forward orf at  [04:06]

-> Mtbook page 467


heavy metal tolerance protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

859 aminoacids, 93 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

heavy metal tolerance protein,
Sanger Rv1348, Tigr MT1390

Rv1349

1737 bp forward orf at  [04:07]

-> Mtbook page 468


probable membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

579 aminoacids, 61 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable membrane protein,
Sanger Rv1349, Tigr MT1391

Rv1350

741 bp forward orf at  [04:07]

-> Mtbook page 469


fabG2

3-oxoacyl-[ACP] Reductase


Function

Classification I. H.1
Category I. Small-molecule metabolism
Class H. Lipid biosynthesis
Group 1. Synthesis of fatty and mycolic acids


Protein

247 aminoacids, 25,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fabG2, fabG2 and M. tuberculosis,
3-oxoacyl-[ACP] Reductase,
Sanger Rv1350, Tigr MT1393

Rv1351

327 bp forward orf at  [04:07]

-> Mtbook page 469


Function

unknown


Protein

109 aminoacids, 12,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1351, Tigr MT1394

Rv1352

369 bp forward orf at  [04:07]

-> Mtbook page 469


Function

unknown


Protein

123 aminoacids, 12,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1352, Tigr MT1396

Rv1353c

783 bp reverse orf at  [04:07]

-> Mtbook page 469


transcriptional regulator (TetR/AcrR family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

261 aminoacids, 28,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (TetR/AcrR family),
Sanger Rv1353c, Tigr MT1396

Rv1354c

1869 bp reverse orf at  [04:08]

-> Mtbook page 470


Function

unknown


Protein

623 aminoacids, 67,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1354c, Tigr MT1397

Rv1355c

2145 bp reverse orf at  [04:08]

-> Mtbook page 470


moeY

weak similarity to E. coli MoeB


Function

Classification I. G.4
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 4. Molybdopterin


Protein

715 aminoacids, 78,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: moeY, moeY and M. tuberculosis,
weak similarity to E. coli MoeB,
Sanger Rv1355c, Tigr MT1398