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Dr. PI's Mtbook

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Rv1302

1212 bp forward orf at  [03:58]

-> Mtbook page 451


rfe

undecaprenyl-phosphate a -N-acetylglucosaminyltransferase


Function

Classification II. C.2
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 2. Surface polysaccharides, lipopolysaccharides, proteins and antigens


Protein

404 aminoacids, 42,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rfe, rfe and M. tuberculosis,
undecaprenyl-phosphate a -N-acetylglucosaminyltransferase,
Sanger Rv1302, Tigr MT1341

Rv1303

483 bp forward orf at  [03:58]

-> Mtbook page 451


Function

unknown


Protein

161 aminoacids, 16,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1303, Tigr MT1343

Rv1304

750 bp forward orf at  [03:58]

-> Mtbook page 451


atpB

ATP synthase a chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

250 aminoacids, 27,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpB, atpB and M. tuberculosis,
ATP synthase a chain,
Sanger Rv1304, Tigr MT1344

Rv1305

243 bp forward orf at  [03:58]

-> Mtbook page 451


atpE

ATP synthase c chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

81 aminoacids, 8,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpE, atpE and M. tuberculosis,
ATP synthase c chain,
Sanger Rv1305, Tigr MT1345

Rv1306

513 bp forward orf at  [03:58]

-> Mtbook page 452


atpF

ATP synthase b chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

171 aminoacids, 18,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpF, atpF and M. tuberculosis,
ATP synthase b chain,
Sanger Rv1306, Tigr MT1346

Rv1307

1338 bp forward orf at  [03:58]

-> Mtbook page 452


atpH

ATP synthase d chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

446 aminoacids, 48,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpH, atpH and M. tuberculosis,
ATP synthase d chain ,
Sanger Rv1307, Tigr MT1347

Rv1308

1647 bp forward orf at  [03:58]

-> Mtbook page 452


atpA

ATP synthase a chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

549 aminoacids, 59,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpA, atpA and M. tuberculosis,
ATP synthase a chain,
Sanger Rv1308, Tigr MT1348

Rv1309

915 bp forward orf at  [03:59]

-> Mtbook page 453


atpG

ATP synthase g chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

305 aminoacids, 33,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpG, atpG and M. tuberculosis,
ATP synthase g chain,
Sanger Rv1309, Tigr MT1349

Rv1310

1458 bp forward orf at  [03:59]

-> Mtbook page 453


atpD

ATP synthase b chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

486 aminoacids, 53,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpD, atpD and M. tuberculosis,
ATP synthase b chain,
Sanger Rv1310, Tigr MT1350

Rv1311

363 bp forward orf at  [03:59]

-> Mtbook page 453


atpC

ATP synthase e chain


Function

Classification I. B.8
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 8. ATP-proton motive force


Protein

121 aminoacids, 13,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: atpC, atpC and M. tuberculosis,
ATP synthase e chain,
Sanger Rv1311, Tigr MT1351

Rv1312

441 bp forward orf at  [03:59]

-> Mtbook page 453


Function

unknown


Protein

147 aminoacids, 16,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1312, Tigr MT1352

Rv1313c

1332 bp reverse orf at  [03:59]

-> Mtbook page 454


IS1557

transposase


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

444 aminoacids, 50,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1557, IS1557 and M. tuberculosis,
transposase,
Sanger Rv1313c, Tigr MT1353

Rv1314c

579 bp reverse orf at  [03:59]

-> Mtbook page 454


Function

unknown


Protein

193 aminoacids, 20,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1314c, Tigr MT1354

Rv1315

1254 bp forward orf at  [03:59]

-> Mtbook page 454


murA

UDP-N-acetylglucosamine-1-carboxyvinyltransferase


Function

Classification II. C.3
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 3. Murein sacculus and peptidoglycan


Protein

418 aminoacids, 44 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: murA, murA and M. tuberculosis,
UDP-N-acetylglucosamine-1-carboxyvinyltransferase,
Sanger Rv1315, Tigr MT1355

Rv1316c

495 bp reverse orf at  [04:01]

-> Mtbook page 456


ogt

methylated-DNA-protein-cysteine methyltransferase


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

165 aminoacids, 17,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ogt, ogt and M. tuberculosis,
methylated-DNA-protein-cysteine methyltransferase,
Sanger Rv1316c, Tigr MT1357

Rv1317c

1488 bp reverse orf at  [04:01]

-> Mtbook page 457


alkA

DNA-3-methyladenine glycosidase II


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

496 aminoacids, 53,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: alkA, alkA and M. tuberculosis,
DNA-3-methyladenine glycosidase II,
Sanger Rv1317c, Tigr MT1358

Rv1318c

1623 bp reverse orf at  [04:01]

-> Mtbook page 457


similar at C-term to adenylate cyclases


Function

Classification IV. J
Category IV. Other
Class J. Cyclases (6)


Protein

541 aminoacids, 59,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar at C-term to adenylate cyclases,
Sanger Rv1318c, Tigr MT1359

Rv1319c

1605 bp reverse orf at  [04:01]

-> Mtbook page 458


similar at C-term to adenylate cyclases


Function

Classification IV. J
Category IV. Other
Class J. Cyclases (6)


Protein

535 aminoacids, 58,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar at C-term to adenylate cyclases,
Sanger Rv1319c, Tigr MT1360

Rv1320c

1701 bp reverse orf at  [04:01]

-> Mtbook page 458


similar at C-term to adenylate cyclases


Function

Classification IV. J
Category IV. Other
Class J. Cyclases (6)


Protein

567 aminoacids, 62 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar at C-term to adenylate cyclases,
Sanger Rv1320c, Tigr MT1361

Rv1321

678 bp forward orf at  [04:02]

-> Mtbook page 459


Function

unknown


Protein

226 aminoacids, 25,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1321, Tigr MT1363

Rv1322

294 bp forward orf at  [04:02]

-> Mtbook page 459


Function

unknown


Protein

98 aminoacids, 11,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1322

Rv1323

1167 bp forward orf at  [04:02]

-> Mtbook page 459


fadA4

acetyl-CoA C-acetyltransferase (aka thiL)


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

389 aminoacids, 40 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadA4, fadA4 and M. tuberculosis,
acetyl-CoA C-acetyltransferase (aka thiL),
Sanger Rv1323, Tigr MT1365

Rv1324

912 bp forward orf at  [04:02]

-> Mtbook page 459


Function

unknown


Protein

304 aminoacids, 32,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1324, Tigr MT1366

Rv1325c

1809 bp reverse orf at  [04:02]

-> Mtbook page 460


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

603 aminoacids, 49,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv1325c, Tigr MT1367

Rv1326c

2193 bp reverse orf at  [04:03]

-> Mtbook page 460


glgB

1,4-a -glucan branching enzyme


Function

Classification II. A.8
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 8. Polysaccharides (cytoplasmic)


Protein

731 aminoacids, 81,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glgB, glgB and M. tuberculosis,
1,4-a -glucan branching enzyme,
Sanger Rv1326c, Tigr MT1368