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Dr. PI's Mtbook

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Rv1166

1905 bp forward orf at  [03:31]

-> Mtbook page 401


lpqW

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

635 aminoacids, 66,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lpqW, lpqW and M. tuberculosis,
lipoprotein,
Sanger Rv1166, Tigr MT1203

Rv1167c

603 bp reverse orf at  [03:31]

-> Mtbook page 401


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

201 aminoacids, 22 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv1167c, Tigr MT1204

Rv1168c

1038 bp reverse orf at  [03:31]

-> Mtbook page 401


PPE


Function

Classification IV. C.2
Category IV. Other
Class C. PE and PPE families
Group 2.PPE family (68)


Protein

346 aminoacids, 35,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PPE, PPE and M. tuberculosis,
Sanger Rv1168c, Tigr MT1205

Rv1169c

300 bp reverse orf at  [03:32]

-> Mtbook page 402


PE


Function

Classification IV. C.1.a
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup a


Protein

100 aminoacids, 10,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE, PE and M. tuberculosis,
Sanger Rv1169c, Tigr MT1206

Rv1170

909 bp forward orf at  [03:32]

-> Mtbook page 402


similar to S. lincolnensis lmbE


Function

Classification IV. D
Category IV. Other
Class D. Antibiotic production and resistance


Protein

303 aminoacids, 31,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to S. lincolnensis lmbE,
Sanger Rv1170, Tigr MT1207

Rv1171

360 bp forward orf at  [03:32]

-> Mtbook page 402


Function

unknown


Protein

120 aminoacids, 12,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1171, Tigr MT1208

Rv1172c

924 bp reverse orf at  [03:32]

-> Mtbook page 402


PE


Function

Classification IV. C.1.a
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup a


Protein

308 aminoacids, 31 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE, PE and M. tuberculosis,
Sanger Rv1172c, Tigr MT1209

Rv1173

2568 bp forward orf at  [03:32]

-> Mtbook page 403


Function

unknown


Protein

856 aminoacids, 92,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1173, Tigr MT1210

Rv1174c

330 bp reverse orf at  [03:33]

-> Mtbook page 403


Function

unknown


Protein

110 aminoacids, 10,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1174c, Tigr MT1211

Rv1175c

2022 bp reverse orf at  [03:33]

-> Mtbook page 404


fadH

2,4-Dienoyl-CoA Reductase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

674 aminoacids, 72,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadH, fadH and M. tuberculosis,
2,4-Dienoyl-CoA Reductase,
Sanger Rv1175c, Tigr MT1212

Rv1176c

567 bp reverse orf at  [03:33]

-> Mtbook page 404


Function

unknown


Protein

189 aminoacids, 21,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1176c, Tigr MT1213

Rv1177

324 bp forward orf at  [03:33]

-> Mtbook page 405


fdxC

ferredoxin 4Fe-4S


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

108 aminoacids, 11,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fdxC, fdxC and M. tuberculosis,
ferredoxin 4Fe-4S,
Sanger Rv1177, Tigr MT1214

Rv1178

1086 bp forward orf at  [03:33]

-> Mtbook page 405


possible aminotransferase


Function

Classification IV. H
Category IV. Other
Class H. Miscellaneous transferases (61)


Protein

362 aminoacids, 37,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible aminotransferase,
Sanger Rv1178, Tigr MT1215

Rv1179c

2817 bp reverse orf at  [03:33]

-> Mtbook page 405


Function

unknown


Protein

939 aminoacids, 100,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1179c, Tigr MT1217

Rv1180

1464 bp forward orf at  [03:34]

-> Mtbook page 406


pks3

polyketide synthase


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

488 aminoacids, 50,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pks3, pks3 and M. tuberculosis,
polyketide synthase,
Sanger Rv1180, Tigr MT1218

Rv1181

4746 bp forward orf at  [03:34]

-> Mtbook page 406


pks4

polyketide synthase


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

1582 aminoacids, 168,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: pks4, pks4 and M. tuberculosis,
polyketide synthase,
Sanger Rv1181, Tigr MT1218

Rv1182

1416 bp forward orf at  [03:35]

-> Mtbook page 408


papA3

PKS-associated protein, unknown function


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

472 aminoacids, 51,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: papA3, papA3 and M. tuberculosis,
PKS-associated protein, unknown function,
Sanger Rv1182, Tigr MT1219

Rv1183

3006 bp forward orf at  [03:35]

-> Mtbook page 408


mmpL10

conserved large membrane protein


Function

Classification II. C.4
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 4. Conserved membrane proteins


Protein

1002 aminoacids, 106,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mmpL10, mmpL10 and M. tuberculosis,
conserved large membrane protein,
Sanger Rv1183, Tigr MT1220

Rv1184c

1077 bp reverse orf at  [03:36]

-> Mtbook page 409


Function

unknown


Protein

359 aminoacids, 37,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1184c, Tigr MT1221

Rv1185c

1734 bp reverse orf at  [03:36]

-> Mtbook page 410


fadD21

acyl-CoA synthase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

578 aminoacids, 62,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadD21, fadD21 and M. tuberculosis,
acyl-CoA synthase,
Sanger Rv1185c, Tigr MT1222

Rv1186c

1614 bp reverse orf at  [03:36]

-> Mtbook page 410


Function

unknown


Protein

538 aminoacids, 57,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1186c, Tigr MT1223