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Dr. PI's Mtbook

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Rv1136

339 bp forward orf at  [03:26]

-> Mtbook page 391


probable carnitine racemase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

113 aminoacids, 11,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable carnitine racemase,
Sanger Rv1136

Rv1137c

366 bp reverse orf at  [03:26]

-> Mtbook page 391


Function

unknown


Protein

122 aminoacids, 12,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1137c, Tigr MT1169

Rv1138c

1014 bp reverse orf at  [03:26]

-> Mtbook page 391


Function

unknown


Protein

338 aminoacids, 36,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1138c, Tigr MT1171

Rv1139c

498 bp reverse orf at  [03:26]

-> Mtbook page 391


Function

unknown


Protein

166 aminoacids, 19 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1139c, Tigr MT1172

Rv1140

846 bp forward orf at  [03:26]

-> Mtbook page 392


Function

unknown


Protein

282 aminoacids, 30,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1140, Tigr MT1173

Rv1141c

804 bp reverse orf at  [03:26]

-> Mtbook page 392


echA11

enoyl-CoA hydratase/isomerase superfamily


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

268 aminoacids, 27,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: echA11, echA11 and M. tuberculosis,
enoyl-CoA hydratase/isomerase superfamily,
Sanger Rv1141c, Tigr MT1174

Rv1142c

804 bp reverse orf at  [03:27]

-> Mtbook page 392


echA10

enoyl-CoA hydratase/isomerase superfamily


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

268 aminoacids, 27,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: echA10, echA10 and M. tuberculosis,
enoyl-CoA hydratase/isomerase superfamily,
Sanger Rv1142c, Tigr MT1175

Rv1143

1080 bp forward orf at  [03:27]

-> Mtbook page 392


mcr

a -methyl acyl-CoA racemase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

360 aminoacids, 38,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mcr, mcr and M. tuberculosis,
a -methyl acyl-CoA racemase,
Sanger Rv1143, Tigr MT1176

Rv1144

750 bp forward orf at  [03:27]

-> Mtbook page 393


short-chain alcohol dehydrogenase


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

250 aminoacids, 25,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

short-chain alcohol dehydrogenase,
Sanger Rv1144, Tigr MT1177

Rv1145

909 bp forward orf at  [03:27]

-> Mtbook page 393


probable drug transporter


Function

Classification III. A.6
Category III. Cell processes
Class A. Transport/binding proteins
Group 6. Efflux proteins


Protein

303 aminoacids, 32,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable drug transporter,
Sanger Rv1145, Tigr MT1179

Rv1146

1410 bp forward orf at  [03:27]

-> Mtbook page 394


probable drug transporter


Function

Classification III. A.6
Category III. Cell processes
Class A. Transport/binding proteins
Group 6. Efflux proteins


Protein

470 aminoacids, 50 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable drug transporter,
Sanger Rv1146, Tigr MT1179

Rv1147

648 bp forward orf at  [03:28]

-> Mtbook page 394


similar to phosphatidylethanolamine N-methyltransferase


Function

Classification IV. H
Category IV. Other
Class H. Miscellaneous transferases (61)


Protein

216 aminoacids, 23,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to phosphatidylethanolamine N-methyltransferase,
Sanger Rv1147, Tigr MT1180

Rv1148c

1446 bp reverse orf at  [03:28]

-> Mtbook page 394


REP


Function

Classification IV. B.2
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 2.REP13E12 family (10)


Protein

482 aminoacids, 52,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: REP, REP and M. tuberculosis,
Sanger Rv1148c, Tigr MT1183

Rv1149

405 bp forward orf at  [03:28]

-> Mtbook page 395


Function

Classification IV. B.1.a
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup a


Protein

135 aminoacids, 15,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1149, Tigr MT1184

Rv1150

549 bp forward orf at  [03:28]

-> Mtbook page 395


Function

Classification IV. B.1.a
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup a


Protein

183 aminoacids, 20,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1150

Rv1151c

711 bp reverse orf at  [03:28]

-> Mtbook page 395


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

237 aminoacids, 25,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv1151c, Tigr MT1185

Rv1152

363 bp forward orf at  [03:28]

-> Mtbook page 395


transcriptional regulator (GntR family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

121 aminoacids, 13,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (GntR family),
Sanger Rv1152, Tigr MT1186

Rv1153c

846 bp reverse orf at  [03:28]

-> Mtbook page 396


omt

PKS o-methyltransferase


Function

Classification I. I
Category I. Small-molecule metabolism
Class I. Polyketide and non-ribosomal peptide synthesis


Protein

282 aminoacids, 30,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: omt, omt and M. tuberculosis,
PKS o-methyltransferase,
Sanger Rv1153c, Tigr MT1187

Rv1154c

639 bp reverse orf at  [03:29]

-> Mtbook page 396


Function

unknown


Protein

213 aminoacids, 23 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1154c, Tigr MT1188

Rv1155

441 bp forward orf at  [03:29]

-> Mtbook page 396


Function

unknown


Protein

147 aminoacids, 16,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1155, Tigr MT1189

Rv1156

585 bp forward orf at  [03:29]

-> Mtbook page 396


Function

unknown


Protein

195 aminoacids, 20,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1156, Tigr MT1191

Rv1157c

1113 bp reverse orf at  [03:29]

-> Mtbook page 397


Function

unknown


Protein

371 aminoacids, 36,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1157c

Rv1158c

681 bp reverse orf at  [03:29]

-> Mtbook page 397


Function

unknown


Protein

227 aminoacids, 21,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1158c, Tigr MT1194

Rv1159

1293 bp forward orf at  [03:29]

-> Mtbook page 397


probable membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

431 aminoacids, 47,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable membrane protein,
Sanger Rv1159, Tigr MT1195

Rv1160

423 bp forward orf at  [03:29]

-> Mtbook page 398


mutT2

MutT homologue


Function

Classification II. A.5
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 5. DNA replication, repair, recombination and restriction/ modification


Protein

141 aminoacids, 15,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mutT2, mutT2 and M. tuberculosis,
MutT homologue,
Sanger Rv1160, Tigr MT1197

Rv1161

3696 bp forward orf at  [03:30]

-> Mtbook page 398


narG

nitrate reductase a subunit


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

1232 aminoacids, 136,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: narG, narG and M. tuberculosis,
nitrate reductase a subunit,
Sanger Rv1161, Tigr MT1198

Rv1162

1674 bp forward orf at  [03:30]

-> Mtbook page 399


narH

nitrate reductase b chain


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

558 aminoacids, 62 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: narH, narH and M. tuberculosis,
nitrate reductase b chain,
Sanger Rv1162, Tigr MT1199

Rv1163

603 bp forward orf at  [03:30]

-> Mtbook page 400


narJ

nitrate reductase d chain


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

201 aminoacids, 21,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: narJ, narJ and M. tuberculosis,
nitrate reductase d chain,
Sanger Rv1163, Tigr MT1200

Rv1164

738 bp forward orf at  [03:31]

-> Mtbook page 400


narI

nitrate reductase g chain


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

246 aminoacids, 28 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: narI, narI and M. tuberculosis,
nitrate reductase g chain,
Sanger Rv1164, Tigr MT1201

Rv1165

1884 bp forward orf at  [03:31]

-> Mtbook page 400


Function

unknown


Protein

628 aminoacids, 67,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1165, Tigr MT1202