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Dr. PI's Mtbook

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Rv1104

687 bp forward orf at  [03:20]

-> Mtbook page 381


probable esterase pseudogene


Function

Classification II. B.5
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 5. Esterases and lipases


Protein

229 aminoacids, 25,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable esterase pseudogene,
Sanger Rv1104, Tigr MT1136

Rv1105

540 bp forward orf at  [03:21]

-> Mtbook page 381


probable esterase pseudogene


Function

Classification II. B.5
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 5. Esterases and lipases


Protein

180 aminoacids, 20,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable esterase pseudogene ,
Sanger Rv1105, Tigr MT1136

Rv1106c

1110 bp reverse orf at  [03:21]

-> Mtbook page 381


probable cholesterol dehydrogenase


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

370 aminoacids, 40,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable cholesterol dehydrogenase,
Sanger Rv1106c, Tigr MT1137

Rv1107c

255 bp reverse orf at  [03:21]

-> Mtbook page 381


xseB

exonuclease VII small subunit


Function

Classification II. B.2
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 2. DNA


Protein

85 aminoacids, 9,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: xseB, xseB and M. tuberculosis,
exonuclease VII small subunit ,
Sanger Rv1107c, Tigr MT1138

Rv1108c

1245 bp reverse orf at  [03:21]

-> Mtbook page 381


xseA

exonuclease VII large subunit


Function

Classification II. B.2
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 2. DNA


Protein

415 aminoacids, 44,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: xseA, xseA and M. tuberculosis,
exonuclease VII large subunit,
Sanger Rv1108c, Tigr MT1139

Rv1109c

636 bp reverse orf at  [03:21]

-> Mtbook page 382


Function

unknown


Protein

212 aminoacids, 23 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1109c, Tigr MT1140

Rv1110

1005 bp forward orf at  [03:21]

-> Mtbook page 382


lytB'

very similar to LytB


Function

Classification II. C.3
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 3. Murein sacculus and peptidoglycan


Protein

335 aminoacids, 36,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lytB', lytB' and M. tuberculosis,
very similar to LytB,
Sanger Rv1110, Tigr MT1141

Rv1111c

912 bp reverse orf at  [03:21]

-> Mtbook page 382


Function

unknown


Protein

304 aminoacids, 34,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1111c, Tigr MT1142

Rv1112

1071 bp forward orf at  [03:22]

-> Mtbook page 383


Function

unknown


Protein

357 aminoacids, 38,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1112, Tigr MT1143

Rv1113

195 bp forward orf at  [03:22]

-> Mtbook page 383


Function

unknown


Protein

65 aminoacids, 7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1113

Rv1114

372 bp forward orf at  [03:22]

-> Mtbook page 383


Function

unknown


Protein

124 aminoacids, 13,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1114, Tigr MT1144

Rv1115

696 bp forward orf at  [03:22]

-> Mtbook page 383


Function

unknown


Protein

232 aminoacids, 24,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1115, Tigr MT1145

Rv1116

183 bp forward orf at  [03:22]

-> Mtbook page 384


Function

unknown


Protein

61 aminoacids, 7,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1116, Tigr MT1146

Rv1117

321 bp forward orf at  [03:22]

-> Mtbook page 384


Function

unknown


Protein

107 aminoacids, 12,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1117, Tigr MT1149

Rv1118c

858 bp reverse orf at  [03:22]

-> Mtbook page 384


Function

unknown


Protein

286 aminoacids, 32,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1118c, Tigr MT1150

Rv1119c

147 bp reverse orf at  [03:22]

-> Mtbook page 384


Function

unknown


Protein

49 aminoacids, 5,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1119c, Tigr MT1151

Rv1120c

492 bp reverse orf at  [03:22]

-> Mtbook page 384


Function

unknown


Protein

164 aminoacids, 18,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1120c, Tigr MT1152

Rv1121

1398 bp forward orf at  [03:22]

-> Mtbook page 384


zwf

glucose-6-phosphate 1-dehydrogenase


Function

Classification I. B.5
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 5. Pentose phosphate pathway


Protein

466 aminoacids, 52,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: zwf, zwf and M. tuberculosis,
glucose-6-phosphate 1-dehydrogenase,
Sanger Rv1121, Tigr MT1153

Rv1122

1020 bp forward orf at  [03:23]

-> Mtbook page 385


gnd2

6-phosphogluconate dehydrogenase (Gram +)


Function

Classification I. B.5
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 5. Pentose phosphate pathway


Protein

340 aminoacids, 36,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: gnd2, gnd2 and M. tuberculosis,
6-phosphogluconate dehydrogenase (Gram +),
Sanger Rv1122, Tigr MT1054

Rv1123c

906 bp reverse orf at  [03:23]

-> Mtbook page 385


bpoB

probable non-heme bromoperoxidase


Function

Classification III. F
Category III. Cell processes
Class F. Detoxification


Protein

302 aminoacids, 32,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: bpoB, bpoB and M. tuberculosis,
probable non-heme bromoperoxidase,
Sanger Rv1123c, Tigr MT1155

Rv1124

948 bp forward orf at  [03:23]

-> Mtbook page 385


ephC

probable epoxide hydrolase


Function

Classification III. F
Category III. Cell processes
Class F. Detoxification


Protein

316 aminoacids, 34,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ephC, ephC and M. tuberculosis,
probable epoxide hydrolase,
Sanger Rv1124, Tigr MT1156

Rv1125

1242 bp forward orf at  [03:23]

-> Mtbook page 386


Function

unknown


Protein

414 aminoacids, 44,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1125, Tigr MT1157

Rv1126c

603 bp reverse orf at  [03:23]

-> Mtbook page 386


Function

unknown


Protein

201 aminoacids, 22,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1126c, Tigr MT1158

Rv1127c

1470 bp reverse orf at  [03:23]

-> Mtbook page 386


ppdK

similar to pyruvate, phosphate dikinase


Function

Classification I. C.1
Category I. Small-molecule metabolism
Class C. Central intermediary metabolism
Group 1. General


Protein

490 aminoacids, 52 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: ppdK, ppdK and M. tuberculosis,
similar to pyruvate, phosphate dikinase ,
Sanger Rv1127c, Tigr MT1159

Rv1128c

1353 bp reverse orf at  [03:24]

-> Mtbook page 387


REP


Function

Classification IV. B.2
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 2.REP13E12 family (10)


Protein

451 aminoacids, 49,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: REP, REP and M. tuberculosis,
Sanger Rv1128c, Tigr MT1160

Rv1129c

1458 bp reverse orf at  [03:24]

-> Mtbook page 387


transcriptional regulator (PbsX/Xre family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

486 aminoacids, 54,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (PbsX/Xre family),
Sanger Rv1129c

Rv1130

1578 bp forward orf at  [03:24]

-> Mtbook page 388


Function

unknown


Protein

526 aminoacids, 57,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1130, Tigr MT1162

Rv1131

1179 bp forward orf at  [03:25]

-> Mtbook page 388


gltA1

citrate synthase 3


Function

Classification I. B.3
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 3. TCA cycle


Protein

393 aminoacids, 43 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: gltA1, gltA1 and M. tuberculosis,
citrate synthase 3,
Sanger Rv1131, Tigr MT1163

Rv1132

1728 bp forward orf at  [03:25]

-> Mtbook page 389


possible transporter


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

576 aminoacids, 64 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible transporter,
Sanger Rv1132, Tigr MT1164

Rv1133c

2277 bp reverse orf at  [03:25]

-> Mtbook page 389


metE

5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase


Function

Classification I. D.2
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 2. Aspartate family


Protein

759 aminoacids, 81,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: metE, metE and M. tuberculosis,
5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase,
Sanger Rv1133c, Tigr MT1165

Rv1134

234 bp forward orf at  [03:25]

-> Mtbook page 390


Function

unknown


Protein

78 aminoacids, 8,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1134, Tigr MT1167

Rv1135c

1854 bp reverse orf at  [03:26]

-> Mtbook page 390


PPE


Function

Classification IV. C.2
Category IV. Other
Class C. PE and PPE families
Group 2.PPE family (68)


Protein

618 aminoacids, 60,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PPE, PPE and M. tuberculosis,
Sanger Rv1135c, Tigr MT1168