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Dr. PI's Mtbook

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Rv1075c

942 bp reverse orf at  [03:15]

-> Mtbook page 371


Function

unknown


Protein

314 aminoacids, 32,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1075c, Tigr MT1105

Rv1076

891 bp forward orf at  [03:15]

-> Mtbook page 371


lipU

probable esterase


Function

Classification II. B.5
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 5. Esterases and lipases


Protein

297 aminoacids, 31,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lipU, lipU and M. tuberculosis,
probable esterase,
Sanger Rv1076, Tigr MT1106

Rv1077

1392 bp forward orf at  [03:16]

-> Mtbook page 371


cysM2

cystathionine b -synthase


Function

Classification I. D.3
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 3. Serine family


Protein

464 aminoacids, 48,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cysM2, cysM2 and M. tuberculosis,
cystathionine b -synthase,
Sanger Rv1077, Tigr MT1108

Rv1078

720 bp forward orf at  [03:16]

-> Mtbook page 372


Function

unknown


Protein

240 aminoacids, 25,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1078, Tigr MT1109

Rv1079

1164 bp forward orf at  [03:16]

-> Mtbook page 372


metB

cystathionine g -synthase


Function

Classification I. D.2
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 2. Aspartate family


Protein

388 aminoacids, 41 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: metB, metB and M. tuberculosis,
cystathionine g -synthase,
Sanger Rv1079, Tigr MT1110

Rv1080c

492 bp reverse orf at  [03:16]

-> Mtbook page 373


greA

transcription elongation factor G


Function

Classification II. A.6
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 6. Protein translation and modification


Protein

164 aminoacids, 17,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: greA, greA and M. tuberculosis,
transcription elongation factor G,
Sanger Rv1080c, Tigr MT1111

Rv1081c

432 bp reverse orf at  [03:16]

-> Mtbook page 373


Function

unknown


Protein

144 aminoacids, 15,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1081c, Tigr MT1112

Rv1082

864 bp forward orf at  [03:16]

-> Mtbook page 373


similar to S. lincolnensis lmbE


Function

Classification IV. D
Category IV. Other
Class D. Antibiotic production and resistance


Protein

288 aminoacids, 32,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to S. lincolnensis lmbE,
Sanger Rv1082, Tigr MT1113

Rv1083

264 bp forward orf at  [03:17]

-> Mtbook page 373


Function

unknown


Protein

88 aminoacids, 9,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1083, Tigr MT1114

Rv1084

2019 bp forward orf at  [03:17]

-> Mtbook page 373


Function

unknown


Protein

673 aminoacids, 71,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1084, Tigr MT1115

Rv1085c

726 bp reverse orf at  [03:17]

-> Mtbook page 374


possible hemolysin


Function

Classification IV. A
Category IV. Other
Class A. Virulence


Protein

242 aminoacids, 26 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible hemolysin,
Sanger Rv1085c, Tigr MT1117

Rv1086

786 bp forward orf at  [03:17]

-> Mtbook page 374


Function

unknown


Protein

262 aminoacids, 29,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1086

Rv1087

2301 bp forward orf at  [03:17]

-> Mtbook page 374


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

767 aminoacids, 62,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv1087, Tigr MT1118

Rv1088

432 bp forward orf at  [03:18]

-> Mtbook page 375


PE


Function

Classification IV. C.1.a
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup a


Protein

144 aminoacids, 15,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE, PE and M. tuberculosis,
Sanger Rv1088, Tigr MT1119

Rv1089

360 bp forward orf at  [03:18]

-> Mtbook page 375


PE


Function

Classification IV. C.1.a
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup a


Protein

120 aminoacids, 11,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE, PE and M. tuberculosis,
Sanger Rv1089, Tigr MT1120

Rv1090

453 bp forward orf at  [03:18]

-> Mtbook page 376


probable inactivated cellulase/endoglucanase


Function

Classification II. B.4
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 4. Polysaccharides, lipopolysaccharides and phospholipids


Protein

151 aminoacids, 16,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable inactivated cellulase/endoglucanase,
Sanger Rv1090, Tigr MT1122

Rv1091

2559 bp forward orf at  [03:18]

-> Mtbook page 376


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

853 aminoacids, 68,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv1091, Tigr MT1123

Rv1092c

936 bp reverse orf at  [03:18]

-> Mtbook page 377


coaA

pantothenate kinase


Function

Classification I. G.5
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 5. Pantothenate


Protein

312 aminoacids, 35,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: coaA, coaA and M. tuberculosis,
pantothenate kinase,
Sanger Rv1092c, Tigr MT1124

Rv1093

1278 bp forward orf at  [03:19]

-> Mtbook page 377


glyA

serine hydroxymethyltransferase


Function

Classification I. D.3
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 3. Serine family


Protein

426 aminoacids, 45 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: glyA, glyA and M. tuberculosis,
serine hydroxymethyltransferase,
Sanger Rv1093, Tigr MT1125

Rv1094

825 bp forward orf at  [03:19]

-> Mtbook page 378


desA2

acyl-[ACP] desaturase


Function

Classification I. H.2
Category I. Small-molecule metabolism
Class H. Lipid biosynthesis
Group 2. Modification of fatty and mycolic acids


Protein

275 aminoacids, 31,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: desA2, desA2 and M. tuberculosis,
acyl-[ACP] desaturase,
Sanger Rv1094, Tigr MT1126

Rv1095

1299 bp forward orf at  [03:19]

-> Mtbook page 378


phoH2

PhoH-like protein


Function

Classification I. A.4
Category I. Small-molecule metabolism
Class A. Degradation
Group 4. Phosphorous compounds


Protein

433 aminoacids, 46,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: phoH2, phoH2 and M. tuberculosis,
PhoH-like protein,
Sanger Rv1095, Tigr MT1127

Rv1096

873 bp forward orf at  [03:19]

-> Mtbook page 378


carbohydrate degrading enzyme


Function

Classification I. A.1
Category I. Small-molecule metabolism
Class A. Degradation
Group 1. Carbon compounds


Protein

291 aminoacids, 31,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

carbohydrate degrading enzyme ,
Sanger Rv1096, Tigr MT1128

Rv1097c

879 bp reverse orf at  [03:19]

-> Mtbook page 379


probable membrane spanning protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

293 aminoacids, 29,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable membrane spanning protein,
Sanger Rv1097c, Tigr MT1129

Rv1098c

1422 bp reverse orf at  [03:20]

-> Mtbook page 379


fum

fumarase


Function

Classification I. B.3
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 3. TCA cycle


Protein

474 aminoacids, 50,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fum, fum and M. tuberculosis,
fumarase,
Sanger Rv1098c, Tigr MT1130

Rv1099c

984 bp reverse orf at  [03:20]

-> Mtbook page 379


Function

unknown


Protein

328 aminoacids, 34,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1099c, Tigr MT1131

Rv1100

699 bp forward orf at  [03:20]

-> Mtbook page 380


Function

unknown


Protein

233 aminoacids, 24,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1100, Tigr MT1132

Rv1101c

1155 bp reverse orf at  [03:20]

-> Mtbook page 380


putative membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

385 aminoacids, 41,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative membrane protein,
Sanger Rv1101c, Tigr MT1133

Rv1102c

309 bp reverse orf at  [03:20]

-> Mtbook page 380


Function

unknown


Protein

103 aminoacids, 11,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1102c, Tigr MT1134

Rv1103c

318 bp reverse orf at  [03:20]

-> Mtbook page 380


Function

unknown


Protein

106 aminoacids, 11,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1103c, Tigr MT1135