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Dr. PI's Mtbook

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Rv1044

621 bp forward orf at  [03:10]

-> Mtbook page 361


Function

unknown


Protein

207 aminoacids, 22,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1044, Tigr MT1074

Rv1045

879 bp forward orf at  [03:10]

-> Mtbook page 361


Function

unknown


Protein

293 aminoacids, 32 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1045, Tigr MT1075

Rv1046c

717 bp reverse orf at  [03:10]

-> Mtbook page 361


Function

unknown


Protein

239 aminoacids, 26 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1046c

Rv1047

1245 bp forward orf at  [03:10]

-> Mtbook page 361


IS1081


Function

Classification IV. B.1.b
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup b


Protein

415 aminoacids, 45,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1081, IS1081 and M. tuberculosis,
Sanger Rv1047, Tigr MT1076

Rv1048c

1113 bp reverse orf at  [03:11]

-> Mtbook page 362


Function

unknown


Protein

371 aminoacids, 40,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1048c, Tigr MT1078

Rv1049

444 bp forward orf at  [03:11]

-> Mtbook page 362


transcriptional regulator (MarR family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

148 aminoacids, 16 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (MarR family),
Sanger Rv1049, Tigr MT1079

Rv1050

903 bp forward orf at  [03:11]

-> Mtbook page 362


probable oxidoreductaseoxidoreducatse


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

301 aminoacids, 32,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable oxidoreductaseoxidoreducatse,
Sanger Rv1050, Tigr MT1080

Rv1051c

753 bp reverse orf at  [03:11]

-> Mtbook page 363


Function

unknown


Protein

251 aminoacids, 28,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1051c, Tigr MT1081

Rv1052

387 bp forward orf at  [03:11]

-> Mtbook page 363


Function

unknown


Protein

129 aminoacids, 14,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1052, Tigr MT1083

Rv1053c

273 bp reverse orf at  [03:11]

-> Mtbook page 363


Function

unknown


Protein

91 aminoacids, 10,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1053c

Rv1054

204 bp forward orf at  [03:12]

-> Mtbook page 364


integrase-a


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

68 aminoacids, 7,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

integrase-a,
Sanger Rv1054

Rv1055

234 bp forward orf at  [03:12]

-> Mtbook page 364


integrase-b


Function

Classification IV. B.3
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 3. Phage-related functions


Protein

78 aminoacids, 8,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

integrase-b,
Sanger Rv1055

Rv1056

762 bp forward orf at  [03:12]

-> Mtbook page 364


Function

unknown


Protein

254 aminoacids, 28,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1056, Tigr MT1085

Rv1057

1179 bp forward orf at  [03:12]

-> Mtbook page 365


Function

unknown


Protein

393 aminoacids, 40,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1057, Tigr MT1087

Rv1058

1629 bp forward orf at  [03:12]

-> Mtbook page 365


fadD14

acyl-CoA synthase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

543 aminoacids, 59,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadD14, fadD14 and M. tuberculosis,
acyl-CoA synthase,
Sanger Rv1058, Tigr MT1088

Rv1059

1062 bp forward orf at  [03:12]

-> Mtbook page 365


Function

unknown


Protein

354 aminoacids, 36,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1059, Tigr MT1089

Rv1060

471 bp forward orf at  [03:13]

-> Mtbook page 366


Function

unknown


Protein

157 aminoacids, 16,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1060, Tigr MT1090

Rv1061

861 bp forward orf at  [03:13]

-> Mtbook page 366


Function

unknown


Protein

287 aminoacids, 32 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1061, Tigr MT1091

Rv1062

855 bp forward orf at  [03:13]

-> Mtbook page 366


Function

unknown


Protein

285 aminoacids, 29,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1062, Tigr MT1092

Rv1063c

1080 bp reverse orf at  [03:13]

-> Mtbook page 366


Function

unknown


Protein

360 aminoacids, 37,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1063c, Tigr MT1093

Rv1064c

417 bp reverse orf at  [03:13]

-> Mtbook page 367


lpqV

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

139 aminoacids, 14,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lpqV, lpqV and M. tuberculosis,
lipoprotein,
Sanger Rv1064c, Tigr MT1094

Rv1065

564 bp forward orf at  [03:13]

-> Mtbook page 367


Function

unknown


Protein

188 aminoacids, 20,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1065, Tigr MT1095

Rv1066

393 bp forward orf at  [03:13]

-> Mtbook page 367


Function

unknown


Protein

131 aminoacids, 14 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1066, Tigr MT1096

Rv1067c

2001 bp reverse orf at  [03:13]

-> Mtbook page 367


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

667 aminoacids, 54,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv1067c

Rv1068c

1389 bp reverse orf at  [03:14]

-> Mtbook page 368


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

463 aminoacids, 39,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv1068c

Rv1069c

1761 bp reverse orf at  [03:14]

-> Mtbook page 369


Function

unknown


Protein

587 aminoacids, 64,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1069c, Tigr MT1099

Rv1070c

771 bp reverse orf at  [03:14]

-> Mtbook page 369


echA8

enoyl-CoA hydratase/isomerase superfamily


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

257 aminoacids, 27,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: echA8, echA8 and M. tuberculosis,
enoyl-CoA hydratase/isomerase superfamily,
Sanger Rv1070c, Tigr MT1100

Rv1071c

1035 bp reverse orf at  [03:15]

-> Mtbook page 369


echA9

enoyl-CoA hydratase/isomerase superfamily


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

345 aminoacids, 36,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: echA9, echA9 and M. tuberculosis,
enoyl-CoA hydratase/isomerase superfamily,
Sanger Rv1071c, Tigr MT1101

Rv1072

834 bp forward orf at  [03:15]

-> Mtbook page 370


probable transmembrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

278 aminoacids, 29,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable transmembrane protein,
Sanger Rv1072, Tigr MT1102

Rv1073

849 bp forward orf at  [03:15]

-> Mtbook page 370


Function

unknown


Protein

283 aminoacids, 32 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv1073, Tigr MT1103

Rv1074c

1215 bp reverse orf at  [03:15]

-> Mtbook page 370


fadA3

acetyl-CoA C-acetyltransferase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

405 aminoacids, 42,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadA3, fadA3 and M. tuberculosis,
acetyl-CoA C-acetyltransferase,
Sanger Rv1074c, Tigr MT1104