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Dr. PI's Mtbook

>

Rv0813c

678 bp reverse orf at  [02:28]

-> Mtbook page 281


Function

unknown


Protein

226 aminoacids, 23,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0813c, Tigr MT0834

Rv0814c

300 bp reverse orf at  [02:28]

-> Mtbook page 281


sseC2

thiosulfate sulfurtransferase


Function

Classification I. C.5
Category I. Small-molecule metabolism
Class C. Central intermediary metabolism
Group 5. Sulphur metabolism


Protein

100 aminoacids, 10,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: sseC2, sseC2 and M. tuberculosis,
thiosulfate sulfurtransferase,
Sanger Rv0814c, Tigr MT0836

Rv0815c

831 bp reverse orf at  [02:28]

-> Mtbook page 281


cysA2

thiosulfate sulfurtransferase


Function

Classification I. D.3
Category I. Small-molecule metabolism
Class D. Amino acid biosynthesis
Group 3. Serine family


Protein

277 aminoacids, 31 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cysA2, cysA2 and M. tuberculosis,
thiosulfate sulfurtransferase,
Sanger Rv0815c, Tigr MT0837

Rv0816c

420 bp reverse orf at  [02:28]

-> Mtbook page 281


thiX

equivalent to M. lepraeThiX


Function

Classification I. G.10
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 10. Thioredoxin, glutaredoxin and mycothiol


Protein

140 aminoacids, 14,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: thiX, thiX and M. tuberculosis,
equivalent to M. lepraeThiX,
Sanger Rv0816c, Tigr MT0838

Rv0817c

810 bp reverse orf at  [02:28]

-> Mtbook page 281


probable exported protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

270 aminoacids, 28,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable exported protein,
Sanger Rv0817c, Tigr MT0839

Rv0818

765 bp forward orf at  [02:28]

-> Mtbook page 282


two-component response regulator


Function

Classification I. J.2
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 2. Two component systems


Protein

255 aminoacids, 27,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

two-component response regulator,
Sanger Rv0818, Tigr MT0840

Rv0819

945 bp forward orf at  [02:28]

-> Mtbook page 282


Function

unknown


Protein

315 aminoacids, 33,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0819, Tigr MT0841

Rv0820

774 bp forward orf at  [02:28]

-> Mtbook page 282


phoT

phosphate transport system ABC transporter


Function

Classification III. A.4
Category III. Cell processes
Class A. Transport/binding proteins
Group 4. Anions


Protein

258 aminoacids, 28 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: phoT, phoT and M. tuberculosis,
phosphate transport system ABC transporter,
Sanger Rv0820, Tigr MT0842

Rv0821c

639 bp reverse orf at  [02:29]

-> Mtbook page 282


phoY2

phosphate transport system regulator


Function

Classification III. A.4
Category III. Cell processes
Class A. Transport/binding proteins
Group 4. Anions


Protein

213 aminoacids, 23,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: phoY2, phoY2 and M. tuberculosis,
phosphate transport system regulator,
Sanger Rv0821c, Tigr MT0843

Rv0822c

2052 bp reverse orf at  [02:29]

-> Mtbook page 283


Function

unknown


Protein

684 aminoacids, 72,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0822c, Tigr MT0844

Rv0823c

1167 bp reverse orf at  [02:29]

-> Mtbook page 283


transcriptional regulator (NifR3/Smm1 family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

389 aminoacids, 41,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (NifR3/Smm1 family),
Sanger Rv0823c, Tigr MT0845

Rv0824c

1014 bp reverse orf at  [02:29]

-> Mtbook page 284


desA1

acyl-[ACP] desaturase


Function

Classification I. H.2
Category I. Small-molecule metabolism
Class H. Lipid biosynthesis
Group 2. Modification of fatty and mycolic acids


Protein

338 aminoacids, 38,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: desA1, desA1 and M. tuberculosis,
acyl-[ACP] desaturase,
Sanger Rv0824c, Tigr MT0846

Rv0825c

639 bp reverse orf at  [02:29]

-> Mtbook page 284


Function

unknown


Protein

213 aminoacids, 23,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0825c, Tigr MT0847

Rv0826

1053 bp forward orf at  [02:30]

-> Mtbook page 284


Function

unknown


Protein

351 aminoacids, 40,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0826, Tigr MT0848

Rv0827c

390 bp reverse orf at  [02:30]

-> Mtbook page 285


transcriptional regulator (ArsR family)


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

130 aminoacids, 14,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

transcriptional regulator (ArsR family),
Sanger Rv0827c, Tigr MT0849

Rv0828c

420 bp reverse orf at  [02:30]

-> Mtbook page 285


Function

unknown


Protein

140 aminoacids, 15,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0828c, Tigr MT0850

Rv0829

288 bp forward orf at  [02:30]

-> Mtbook page 285


IS1605'

probable transposase fragment, highly similar to IS1539


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

96 aminoacids, 10,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1605', IS1605' and M. tuberculosis,
probable transposase fragment, highly similar to IS1539,
Sanger Rv0829

Rv0830

903 bp forward orf at  [02:30]

-> Mtbook page 285


Function

unknown


Protein

301 aminoacids, 33,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0830, Tigr MT0851

Rv0831c

813 bp reverse orf at  [02:30]

-> Mtbook page 285


Function

unknown


Protein

271 aminoacids, 30,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0831c, Tigr MT0852

Rv0832

411 bp forward orf at  [02:30]

-> Mtbook page 286


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

137 aminoacids, 13,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv0832, Tigr MT0854

Rv0833

2247 bp forward orf at  [02:31]

-> Mtbook page 286


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

749 aminoacids, 57,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv0833, Tigr MT0855

Rv0834c

2646 bp reverse orf at  [02:31]

-> Mtbook page 287


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

882 aminoacids, 71,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv0834c, Tigr MT0855

Rv0835

642 bp forward orf at  [02:31]

-> Mtbook page 288


lpqQ

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

214 aminoacids, 22,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lpqQ, lpqQ and M. tuberculosis,
lipoprotein,
Sanger Rv0835, Tigr MT0856

Rv0836c

651 bp reverse orf at  [02:32]

-> Mtbook page 288


Function

unknown


Protein

217 aminoacids, 23,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0836c, Tigr MT0857

Rv0837c

1026 bp reverse orf at  [02:32]

-> Mtbook page 288


Function

unknown


Protein

342 aminoacids, 36,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0837c, Tigr MT0858

Rv0838

768 bp forward orf at  [02:32]

-> Mtbook page 289


lpqR

lipoprotein


Function

Classification II. C.1
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 1. Lipoproteins ( lppA-lpr0)65


Protein

256 aminoacids, 27,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: lpqR, lpqR and M. tuberculosis,
lipoprotein,
Sanger Rv0838

Rv0839

810 bp forward orf at  [02:32]

-> Mtbook page 289


Function

unknown


Protein

270 aminoacids, 29,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0839

Rv0840c

858 bp reverse orf at  [02:32]

-> Mtbook page 290


probable proline iminopeptidase


Function

Classification II. B.3
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 3. Proteins, peptides and glycopeptides


Protein

286 aminoacids, 31,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable proline iminopeptidase,
Sanger Rv0840c

Rv0841c

414 bp reverse orf at  [02:33]

-> Mtbook page 290


Function

unknown


Protein

138 aminoacids, 14,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0841c

Rv0842

1290 bp forward orf at  [02:33]

-> Mtbook page 290


Unknown integral membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

430 aminoacids, 43,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Unknown integral membrane protein,
Sanger Rv0842, Tigr MT0864

Rv0843

1002 bp forward orf at  [02:33]

-> Mtbook page 290


similar to various dehydrogenases


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

334 aminoacids, 35,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to various dehydrogenases,
Sanger Rv0843, Tigr MT0865