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Dr. PI's Mtbook

>

Rv0714

366 bp forward orf at  [02:12]

-> Mtbook page 251


rplN

50S ribosomal protein L14


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

122 aminoacids, 13,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplN, rplN and M. tuberculosis,
50S ribosomal protein L14,
Sanger Rv0714, Tigr MT0741

Rv0715

315 bp forward orf at  [02:12]

-> Mtbook page 251


rplX

50S ribosomal protein L24


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

105 aminoacids, 11,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplX, rplX and M. tuberculosis,
50S ribosomal protein L24,
Sanger Rv0715

Rv0716

561 bp forward orf at  [02:12]

-> Mtbook page 251


rplE

50S ribosomal protein L5


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

187 aminoacids, 21 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplE, rplE and M. tuberculosis,
50S ribosomal protein L5,
Sanger Rv0716, Tigr MT0742

Rv0717

183 bp forward orf at  [02:12]

-> Mtbook page 251


rpsN

30S ribosomal protein S14


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

61 aminoacids, 6,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rpsN, rpsN and M. tuberculosis,
30S ribosomal protein S14,
Sanger Rv0717

Rv0718

396 bp forward orf at  [02:12]

-> Mtbook page 251


rpsH

30S ribosomal protein S8


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

132 aminoacids, 14,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rpsH, rpsH and M. tuberculosis,
30S ribosomal protein S8,
Sanger Rv0718, Tigr MT0743

Rv0719

537 bp forward orf at  [02:12]

-> Mtbook page 252


rplF

50S ribosomal protein L6


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

179 aminoacids, 19,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplF, rplF and M. tuberculosis,
50S ribosomal protein L6,
Sanger Rv0719, Tigr MT0744

Rv0720

366 bp forward orf at  [02:12]

-> Mtbook page 252


rplR

50S ribosomal protein L18


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

122 aminoacids, 13,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplR, rplR and M. tuberculosis,
50S ribosomal protein L18,
Sanger Rv0720, Tigr MT0745

Rv0721

660 bp forward orf at  [02:12]

-> Mtbook page 252


rpsE

30S ribosomal protein S5


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

220 aminoacids, 22,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rpsE, rpsE and M. tuberculosis,
30S ribosomal protein S5,
Sanger Rv0721, Tigr MT0746

Rv0722

195 bp forward orf at  [02:13]

-> Mtbook page 252


rpmD

50S ribosomal protein L30


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

65 aminoacids, 7,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rpmD, rpmD and M. tuberculosis,
50S ribosomal protein L30,
Sanger Rv0722, Tigr MT0747

Rv0723

438 bp forward orf at  [02:13]

-> Mtbook page 252


rplO

50S ribosomal protein L15


Function

Classification II. A.1
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 1. Ribosomal protein synthesis and modification


Protein

146 aminoacids, 15,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: rplO, rplO and M. tuberculosis,
50S ribosomal protein L15,
Sanger Rv0723, Tigr MT0748

Rv0724

1869 bp forward orf at  [02:13]

-> Mtbook page 252


sppA

protease IV, signal peptide peptidase


Function

Classification II. B.3
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 3. Proteins, peptides and glycopeptides


Protein

623 aminoacids, 65,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: sppA, sppA and M. tuberculosis,
protease IV, signal peptide peptidase,
Sanger Rv0724, Tigr MT0749

Rv0725c

903 bp reverse orf at  [02:13]

-> Mtbook page 253


Function

unknown


Protein

301 aminoacids, 32,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0725c, Tigr MT0750

Rv0726c

1101 bp reverse orf at  [02:13]

-> Mtbook page 253


Function

unknown


Protein

367 aminoacids, 40,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0726c, Tigr MT0751

Rv0727c

654 bp reverse orf at  [02:13]

-> Mtbook page 254


fucA

L-fuculose phosphate aldolase


Function

Classification I. A.1
Category I. Small-molecule metabolism
Class A. Degradation
Group 1. Carbon compounds


Protein

218 aminoacids, 23,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fucA, fucA and M. tuberculosis,
L-fuculose phosphate aldolase,
Sanger Rv0727c, Tigr MT0752

Rv0728c

978 bp reverse orf at  [02:13]

-> Mtbook page 254


similar to D-3-phosphoglycerate dehydrogenases


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

326 aminoacids, 34,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

similar to D-3-phosphoglycerate dehydrogenases,
Sanger Rv0728c, Tigr MT0753

Rv0729

1344 bp forward orf at  [02:14]

-> Mtbook page 254


xylB

xylulose kinase


Function

Classification I. A.1
Category I. Small-molecule metabolism
Class A. Degradation
Group 1. Carbon compounds


Protein

448 aminoacids, 46,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: xylB, xylB and M. tuberculosis,
xylulose kinase,
Sanger Rv0729, Tigr MT0754

Rv0730

726 bp forward orf at  [02:14]

-> Mtbook page 254


Function

unknown


Protein

242 aminoacids, 26 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0730, Tigr MT0755

Rv0731c

954 bp reverse orf at  [02:14]

-> Mtbook page 255


Function

unknown


Protein

318 aminoacids, 35 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0731c, Tigr MT0756

Rv0732

1323 bp forward orf at  [02:14]

-> Mtbook page 255


secY

SecY subunit of preprotein translocase


Function

Classification III. D
Category III. Cell processes
Class D. Protein and peptide secretion


Protein

441 aminoacids, 47,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: secY, secY and M. tuberculosis,
SecY subunit of preprotein translocase,
Sanger Rv0732, Tigr MT0757

Rv0733

543 bp forward orf at  [02:14]

-> Mtbook page 255


adk

probable adenylate kinase


Function

Classification I. F.5
Category I. Small-molecule metabolism
Class F. Purines, pyrimidines, nucleosides and nucleotides
Group 5. Miscellaneous nucleoside/nucleotide reactions


Protein

181 aminoacids, 20,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: adk, adk and M. tuberculosis,
probable adenylate kinase,
Sanger Rv0733

Rv0734

798 bp forward orf at  [02:14]

-> Mtbook page 256


map'

probable methionine aminopeptidase


Function

Classification II. B.3
Category II. Macromolecule metabolism
Class B. Degradation of macromolecules
Group 3. Proteins, peptides and glycopeptides


Protein

266 aminoacids, 27,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: map', map' and M. tuberculosis,
probable methionine aminopeptidase,
Sanger Rv0734, Tigr MT0758

Rv0735

531 bp forward orf at  [02:15]

-> Mtbook page 256


sigL

sigma-70 factors ECF subfamily


Function

Classification II. A.7
Category II. Macromolecule metabolism
Class A. Synthesis and modification of macromolecules
Group 7. RNA synthesis, RNA modification and DNA transcription


Protein

177 aminoacids, 19,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: sigL, sigL and M. tuberculosis,
sigma-70 factors ECF subfamily,
Sanger Rv0735, Tigr MT0759

Rv0736

750 bp forward orf at  [02:15]

-> Mtbook page 256


Function

unknown


Protein

250 aminoacids, 25,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0736, Tigr MT0760

Rv0737

495 bp forward orf at  [02:15]

-> Mtbook page 256


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

165 aminoacids, 18 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv0737, Tigr MT0762

Rv0738

546 bp forward orf at  [02:15]

-> Mtbook page 257


possible membrane protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

182 aminoacids, 19,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

possible membrane protein,
Sanger Rv0738, Tigr MT0763

Rv0739

804 bp forward orf at  [02:15]

-> Mtbook page 257


Function

unknown


Protein

268 aminoacids, 29,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0739, Tigr MT0764

Rv0740

525 bp forward orf at  [02:15]

-> Mtbook page 257


Function

unknown


Protein

175 aminoacids, 19,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0740, Tigr MT0765

Rv0741

312 bp forward orf at  [02:15]

-> Mtbook page 257


IS1557'

truncated copy of IS1557


Function

Classification IV. B.1.c
Category IV. Other
Class B. IS elements, Repeated sequences, and Phage
Group 1. IS elements
Subgroup c


Protein

104 aminoacids, 11,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: IS1557', IS1557' and M. tuberculosis,
truncated copy of IS1557,
Sanger Rv0741, Tigr MT0767

Rv0742

525 bp forward orf at  [02:15]

-> Mtbook page 258


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

175 aminoacids, 15,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv0742, Tigr MT0768

Rv0743c

555 bp reverse orf at  [02:16]

-> Mtbook page 258


Function

unknown


Protein

185 aminoacids, 20,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0743c, Tigr MT0769

Rv0744c

504 bp reverse orf at  [02:16]

-> Mtbook page 258


putative transcriptional regulator


Function

Classification I. J.1
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 1. Repressors/activators


Protein

168 aminoacids, 19,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

putative transcriptional regulator,
Sanger Rv0744c, Tigr MT0770

Rv0745

525 bp forward orf at  [02:16]

-> Mtbook page 258


Function

unknown


Protein

175 aminoacids, 18,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0745

Rv0746

2349 bp forward orf at  [02:16]

-> Mtbook page 258


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

783 aminoacids, 64,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv0746

Rv0747

2403 bp forward orf at  [02:16]

-> Mtbook page 259


PE_PGRS


Function

Classification IV. C.1.b
Category IV. Other
Class C. PE and PPE families
Group 1. PE family
Subgroup b


Protein

801 aminoacids, 65,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PE_PGRS, PE_PGRS and M. tuberculosis,
Sanger Rv0747

Rv0748

255 bp forward orf at  [02:17]

-> Mtbook page 260


Function

unknown


Protein

85 aminoacids, 9,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0748

Rv0749

426 bp forward orf at  [02:17]

-> Mtbook page 260


Function

unknown


Protein

142 aminoacids, 15,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0749, Tigr MT0773

Rv0750

243 bp forward orf at  [02:17]

-> Mtbook page 260


Function

unknown


Protein

81 aminoacids, 8,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0750, Tigr MT0774

Rv0751c

882 bp reverse orf at  [02:17]

-> Mtbook page 260


mmsB

methylmalmonate semialdehyde oxidoreductase


Function

Classification I. A.2
Category I. Small-molecule metabolism
Class A. Degradation
Group 2. Amino acids and amines


Protein

294 aminoacids, 29,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: mmsB, mmsB and M. tuberculosis,
methylmalmonate semialdehyde oxidoreductase,
Sanger Rv0751c, Tigr MT0775