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Dr. PI's Mtbook

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Rv0243

1320 bp forward orf at  [00:47]

-> Mtbook page 91


fadA2

acetyl-CoA C-acetyltransferase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

440 aminoacids, 46,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadA2, fadA2 and M. tuberculosis,
acetyl-CoA C-acetyltransferase,
Sanger Rv0243, Tigr MT0257

Rv0244c

1833 bp reverse orf at  [00:47]

-> Mtbook page 91


fadE5

acyl-CoA dehydrogenase


Function

Classification I. A.3
Category I. Small-molecule metabolism
Class A. Degradation
Group 3. Fatty acids


Protein

611 aminoacids, 66 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fadE5, fadE5 and M. tuberculosis,
acyl-CoA dehydrogenase,
Sanger Rv0244c, Tigr MT0258

Rv0245

486 bp forward orf at  [00:48]

-> Mtbook page 92


probable monooxygenase


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

162 aminoacids, 17 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable monooxygenase,
Sanger Rv0245, Tigr MT0259

Rv0246

1308 bp forward orf at  [00:48]

-> Mtbook page 92


probable membrane transport protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

436 aminoacids, 45,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable membrane transport protein,
Sanger Rv0246, Tigr MT0260

Rv0247c

744 bp reverse orf at  [00:48]

-> Mtbook page 93


probable iron-sulphur protein


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

248 aminoacids, 28,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable iron-sulphur protein,
Sanger Rv0247c, Tigr MT0261

Rv0248c

1938 bp reverse orf at  [00:48]

-> Mtbook page 93


probable flavoprotein subunit of Rv0247c


Function

Classification I. B.7
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 7. Miscellaneous oxidoreductases and oxygenases 171


Protein

646 aminoacids, 70,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable flavoprotein subunit of Rv0247c,
Sanger Rv0248c, Tigr MT0262

Rv0249c

819 bp reverse orf at  [00:49]

-> Mtbook page 93


probable membrane anchor protein


Function

Classification II. C.5
Category II. Macromolecule metabolism
Class C. Cell envelope
Group 5. Other membrane proteins 211


Protein

273 aminoacids, 31,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

probable membrane anchor protein,
Sanger Rv0249c, Tigr MT0263

Rv0250c

291 bp reverse orf at  [00:49]

-> Mtbook page 94


Function

unknown


Protein

97 aminoacids, 10,9 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0250c, Tigr MT0264

Rv0251c

477 bp reverse orf at  [00:49]

-> Mtbook page 94


hsp

possible heat shock protein


Function

Classification III. B
Category III. Cell processes
Class B. Chaperones/Heat shock


Protein

159 aminoacids, 17,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: hsp, hsp and M. tuberculosis,
possible heat shock protein,
Sanger Rv0251c, Tigr MT0265

Rv0252

2559 bp forward orf at  [00:49]

-> Mtbook page 94


nirB

nitrite reductase flavoprotein


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

853 aminoacids, 90,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: nirB, nirB and M. tuberculosis,
nitrite reductase flavoprotein,
Sanger Rv0252, Tigr MT0266

Rv0253

354 bp forward orf at  [00:49]

-> Mtbook page 95


nirD

probable nitrite reductase small subunit


Function

Classification I. B.6
Category I. Small-molecule metabolism
Class B. Energy metabolism
Group 6. Respiration


Protein

118 aminoacids, 12,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: nirD, nirD and M. tuberculosis,
probable nitrite reductase small subunit ,
Sanger Rv0253

Rv0254c

522 bp reverse orf at  [00:49]

-> Mtbook page 95


cobU

cobinamide kinase


Function

Classification I. G.13
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 13. Cobalamin


Protein

174 aminoacids, 18,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cobU, cobU and M. tuberculosis,
cobinamide kinase,
Sanger Rv0254c, Tigr MT0267

Rv0255c

1482 bp reverse orf at  [00:50]

-> Mtbook page 95


cobQ

cobyric acid synthase


Function

Classification I. G.13
Category I. Small-molecule metabolism
Class G. Biosynthesis of cofactors, prosthetic groups and carriers
Group 13. Cobalamin


Protein

494 aminoacids, 52,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: cobQ, cobQ and M. tuberculosis,
cobyric acid synthase,
Sanger Rv0255c, Tigr MT0268

Rv0256c

1668 bp reverse orf at  [00:50]

-> Mtbook page 96


PPE


Function

Classification IV. C.2
Category IV. Other
Class C. PE and PPE families
Group 2.PPE family (68)


Protein

556 aminoacids, 57 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: PPE, PPE and M. tuberculosis,
Sanger Rv0256c, Tigr MT0269

Rv0257c

321 bp reverse orf at  [00:50]

-> Mtbook page 96


Function

unknown


Protein

107 aminoacids, 11,8 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0257c, Tigr MT0270

Rv0258c

453 bp reverse orf at  [00:50]

-> Mtbook page 96


Function

unknown


Protein

151 aminoacids, 16 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0258c, Tigr MT0271

Rv0259c

741 bp reverse orf at  [00:50]

-> Mtbook page 96


Function

unknown


Protein

247 aminoacids, 26,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0259c, Tigr MT0272

Rv0260c

1143 bp reverse orf at  [00:50]

-> Mtbook page 97


two-component response regulator


Function

Classification I. J.2
Category I. Small-molecule metabolism
Class J. Broad regulatory functions
Group 2. Two component systems


Protein

381 aminoacids, 40,7 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

two-component response regulator,
Sanger Rv0260c, Tigr MT0273

Rv0261c

1407 bp reverse orf at  [00:51]

-> Mtbook page 97


narK3

nitrite extrusion protein1


Function

Classification III. A.4
Category III. Cell processes
Class A. Transport/binding proteins
Group 4. Anions


Protein

469 aminoacids, 49,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: narK3, narK3 and M. tuberculosis,
nitrite extrusion protein1,
Sanger Rv0261c, Tigr MT0274

Rv0262c

543 bp reverse orf at  [00:51]

-> Mtbook page 98


aminoglycoside 2'-N-acetyltransferase


Function

Classification IV. D
Category IV. Other
Class D. Antibiotic production and resistance


Protein

181 aminoacids, 20 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

aminoglycoside 2'-N-acetyltransferase,
Sanger Rv0262c, Tigr MT0275

Rv0263c

900 bp reverse orf at  [00:51]

-> Mtbook page 98


Function

unknown


Protein

300 aminoacids, 32,2 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0263c, Tigr MT0276

Rv0264c

630 bp reverse orf at  [00:51]

-> Mtbook page 98


Function

unknown


Protein

210 aminoacids, 22,5 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0264c, Tigr MT0277

Rv0265c

990 bp reverse orf at  [00:51]

-> Mtbook page 98


fecB2

iron transport protein FeIII dicitrate transporter


Function

Classification III. A.2
Category III. Cell processes
Class A. Transport/binding proteins
Group 2. Cations


Protein

330 aminoacids, 35,3 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: fecB2, fecB2 and M. tuberculosis,
iron transport protein FeIII dicitrate transporter,
Sanger Rv0265c, Tigr MT0278

Rv0266c

3627 bp reverse orf at  [00:51]

-> Mtbook page 99


Function

unknown


Protein

1209 aminoacids, 129,6 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0266c, Tigr MT0279

Rv0267

1389 bp forward orf at  [00:52]

-> Mtbook page 100


narU

similar to nitrite extrusion protein 2


Function

Classification III. A.4
Category III. Cell processes
Class A. Transport/binding proteins
Group 4. Anions


Protein

463 aminoacids, 49,1 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

PubMed: narU, narU and M. tuberculosis,
similar to nitrite extrusion protein 2,
Sanger Rv0267, Tigr MT0280

Rv0268c

507 bp reverse orf at  [00:52]

-> Mtbook page 100


Function

unknown


Protein

169 aminoacids, 19,4 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0268c, Tigr MT0281

Rv0269c

1191 bp reverse orf at  [00:52]

-> Mtbook page 100


Function

unknown


Protein

397 aminoacids, 44 kDa


 

Pedant links: Pedant report, prosite patterns,
intragenome comparison,
blastp homologues

Lookup

Sanger Rv0269c, Tigr MT0282